RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 PIP4K2CQ8TBX8 421 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 PHOSPHO1Q8TCT1 267 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 IGDCC4Q8TDY8 1250 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 HNRNPLLQ8WVV9 542 aaKnown RBP4.9□□□□□ -1.63
BRCA2-205ENST00000533776 DVL3Q92997 716 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-205ENST00000533776 MBD6Q96DN6 1003 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 WRNIP1Q96S55 665 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 TMEM209Q96SK2 561 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 IER2Q9BTL4 223 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 JAM3Q9BX67 310 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 C1QTNF3Q9BXJ4 246 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 SMOC1Q9H4F8 434 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 ST7Q9NRC1 585 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 PPP4R1LQ9P1A2 415 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 ASH2LQ9UBL3 628 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 FTSJ1Q9UET6 329 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 R3HCC1Q9Y3T6 440 aaKnown RBP4.9□□□□□ -1.63
BRCA2-205ENST00000533776 NPFFR2Q9Y5X5 522 aa4.9□□□□□ -1.63
BRCA2-205ENST00000533776 A0A1W2PQU0 124 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 NPEPPSL1A6NEC2 478 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 KRIT1O00522 736 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 SLC27A2O14975 620 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 MAFKO60675 156 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 CYP7B1O75881 506 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 MAP4K2Q12851 820 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 ICAM4Q14773 271 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
BRCA2-205ENST00000533776 KBTBD2Q8IY47 623 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 PHF20Q9BVI0 1012 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 EPN3Q9H201 632 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 JADE2Q9NQC1 790 aa4.89□□□□□ -1.63
BRCA2-205ENST00000533776 C1QTNF3-AMACRE9PGA6 284 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 DLX3O60479 287 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 CAPNS1P04632 268 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 ARHGEF18Q6ZSZ5 1173 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 SPRED1Q7Z699 444 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 HOMEZQ8IX15 550 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 RBM12BQ8IXT5 1001 aaKnown RBP4.88□□□□□ -1.63
BRCA2-205ENST00000533776 CELF2-AS1Q8N7Q2 184 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 SH3RF3Q8TEJ3 882 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-205ENST00000533776 KISS1RQ969F8 398 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-205ENST00000533776 CDIP1Q9H305 208 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 SLC6A20Q9NP91 592 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 GPR27Q9NS67 375 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 ZDHHC9Q9Y397 364 aa4.88□□□□□ -1.63
BRCA2-205ENST00000533776 B4GALT4O60513 344 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 TCF3P15923 654 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 TGM1P22735 817 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 DNAJA1P31689 397 aaKnown RBP4.87□□□□□ -1.63
BRCA2-205ENST00000533776 PPP2CBP62714 309 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 PPP2CAP67775 309 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 ARID5AQ03989 594 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 NFATC3Q12968 1075 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 VASNQ6EMK4 673 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 CYP4F22Q6NT55 531 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 PKN3Q6P5Z2 889 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 CIR1Q86X95 450 aaPredicted RBP4.87□□□□□ -1.63
BRCA2-205ENST00000533776 PROSER1Q86XN7 944 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 MCF2L2Q86YR7 1114 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 PALM2Q8IXS6 379 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 KLHL36Q8N4N3 616 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 CLEC4DQ8WXI8 215 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 NUDT11Q96G61 164 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 PTPN18Q99952 460 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 TINF2Q9BSI4 451 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 MRIQ9BWK5 157 aa4.87□□□□□ -1.63
BRCA2-205ENST00000533776 SCAND2PQ9GZW5 306 aaPredicted RBP4.87□□□□□ -1.63
BRCA2-205ENST00000533776 BARX1Q9HBU1 254 aaPredicted RBP4.87□□□□□ -1.63
BRCA2-205ENST00000533776 GPR42O15529 346 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 LTFP02788 710 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 SLPIP03973 132 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 COL6A1P12109 1028 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 COL6A2P12110 1019 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 GLRBP48167 497 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 EPHB4P54760 987 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 TUSC3Q13454 348 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 HSP90AA2PQ14568 343 aaPredicted RBP4.86□□□□□ -1.63
BRCA2-205ENST00000533776 CDSNQ15517 529 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 CRB2Q5IJ48 1285 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 ZNF585AQ6P3V2 769 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 KCNT2Q6UVM3 1135 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 ANKS3Q6ZW76 656 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 OTOP3Q7RTS5 596 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 TRIM48Q8IWZ4 208 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 TTLL11Q8NHH1 800 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 KCNJ15Q99712 375 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 AARSD1Q9BTE6 412 aaKnown RBP4.86□□□□□ -1.63
BRCA2-205ENST00000533776 KLC2Q9H0B6 622 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 DLL4Q9NR61 685 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 TSC22D4Q9Y3Q8 395 aa4.86□□□□□ -1.63
BRCA2-205ENST00000533776 PRODHO43272 600 aa4.85□□□□□ -1.63
BRCA2-205ENST00000533776 GNAT1P11488 350 aa4.85□□□□□ -1.63
BRCA2-205ENST00000533776 C6P13671 934 aa4.85□□□□□ -1.63
BRCA2-205ENST00000533776 GRK2P25098 689 aa4.85□□□□□ -1.63
BRCA2-205ENST00000533776 GRK3P35626 688 aa4.85□□□□□ -1.63
BRCA2-205ENST00000533776 DDR2Q16832 855 aa4.85□□□□□ -1.63
BRCA2-205ENST00000533776 PAN2Q504Q3 1202 aaKnown RBP4.85□□□□□ -1.63
BRCA2-205ENST00000533776 RSPO2Q6UXX9 243 aaPredicted RBP4.85□□□□□ -1.63
BRCA2-205ENST00000533776 RALYLQ86SE5 291 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms