RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 PCDHA4Q9UN74 947 aa18.05■□□□□ 0.48
TSKU-204ENST00000533752 LIMCH1Q9UPQ0 1083 aa18.05■□□□□ 0.48
TSKU-204ENST00000533752 SORBS3O60504 671 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 PSEN2P49810 448 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 MFSD10Q14728 455 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 RABEP1Q15276 862 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 TDHQ8IZJ6 230 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 CRYGNQ8WXF5 182 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 KAT2BQ92831 832 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 GPR20Q99678 358 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 SDF4Q9BRK5 362 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 TRPV6Q9H1D0 765 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 HIPK3Q9H422 1215 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 KCNH7Q9NS40 1196 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 ORC3Q9UBD5 711 aaPredicted RBP18.04■□□□□ 0.48
TSKU-204ENST00000533752 ZNF215Q9UL58 517 aaPredicted RBP18.04■□□□□ 0.48
TSKU-204ENST00000533752 NOD1Q9Y239 953 aa18.04■□□□□ 0.48
TSKU-204ENST00000533752 NFASCO94856 1347 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 HAS3O00219 553 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 MEIS1O00470 390 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 LGALS2P05162 132 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 CHMP4BP1P59074 171 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 FPGSQ05932 587 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 KIAA0753Q2KHM9 967 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 MFSD5Q6N075 450 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 BLIDQ8IZY5 108 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 C7orf31Q8N865 590 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 NECAB1Q8N987 351 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 KIF2CQ99661 725 aa18.03■□□□□ 0.48
TSKU-204ENST00000533752 JPH1Q9HDC5 661 aaPredicted RBP18.03■□□□□ 0.48
TSKU-204ENST00000533752 SH2B1Q9NRF2 756 aaPredicted RBP18.03■□□□□ 0.48
TSKU-204ENST00000533752 MYH7BA7E2Y1 1941 aa18.02■□□□□ 0.48
TSKU-204ENST00000533752 LARGE1O95461 756 aa18.02■□□□□ 0.48
TSKU-204ENST00000533752 CTDNEP1O95476 244 aa18.02■□□□□ 0.48
TSKU-204ENST00000533752 ITGB8P26012 769 aa18.02■□□□□ 0.48
TSKU-204ENST00000533752 TMEM199Q8N511 208 aa18.02■□□□□ 0.48
TSKU-204ENST00000533752 NSUN7Q8NE18 718 aaKnown RBP18.02■□□□□ 0.48
TSKU-204ENST00000533752 RASGRP4Q8TDF6 673 aa18.02■□□□□ 0.48
TSKU-204ENST00000533752 ZSCAN31Q96LW9 406 aaPredicted RBP18.02■□□□□ 0.48
TSKU-204ENST00000533752 C16orf70Q9BSU1 422 aa18.02■□□□□ 0.48
TSKU-204ENST00000533752 AGO4Q9HCK5 861 aaKnown RBP18.02■□□□□ 0.48
TSKU-204ENST00000533752 TRMT13Q9NUP7 481 aaKnown RBP18.02■□□□□ 0.48
TSKU-204ENST00000533752 GTF2IRD1Q9UHL9 959 aa18.02■□□□□ 0.48
TSKU-204ENST00000533752 H3BRB1 525 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 ST18O60284 1047 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 ATP9AO75110 1047 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 CIITAP33076 1130 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 USP11P51784 963 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 SP4Q02446 784 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 PPIGQ13427 754 aaKnown RBP eCLIP18.01■□□□□ 0.47
TSKU-204ENST00000533752 PLA2G4DQ86XP0 818 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 CCDC155Q8N6L0 562 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 CYP2W1Q8TAV3 490 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 SEPT1Q8WYJ6 367 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 AIFM3Q96NN9 605 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 ALG1Q9BT22 464 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 NOC4LQ9BVI4 516 aaKnown RBP18.01■□□□□ 0.47
TSKU-204ENST00000533752 PPP1R12CQ9BZL4 782 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 TUT1Q9H6E5 874 aaKnown RBP18.01■□□□□ 0.47
TSKU-204ENST00000533752 PKD2L1Q9P0L9 805 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 SLC9A2Q9UBY0 812 aa18.01■□□□□ 0.47
TSKU-204ENST00000533752 FAM86B1E9PN63 330 aa18■□□□□ 0.47
TSKU-204ENST00000533752 FAM86B2P0C5J1 330 aa18■□□□□ 0.47
TSKU-204ENST00000533752 TCF7P36402 384 aaPredicted RBP18■□□□□ 0.47
TSKU-204ENST00000533752 PTGISQ16647 500 aa18■□□□□ 0.47
TSKU-204ENST00000533752 KRT25Q7Z3Z0 450 aa18■□□□□ 0.47
TSKU-204ENST00000533752 LLPHQ9BRT6 129 aaKnown RBP18■□□□□ 0.47
TSKU-204ENST00000533752 PHF20Q9BVI0 1012 aa18■□□□□ 0.47
TSKU-204ENST00000533752 BCAS3Q9H6U6 928 aa18■□□□□ 0.47
TSKU-204ENST00000533752 BRMS1Q9HCU9 246 aa18■□□□□ 0.47
TSKU-204ENST00000533752 TCEAL9Q9UHQ7 104 aa18■□□□□ 0.47
TSKU-204ENST00000533752 GTF3C3Q9Y5Q9 886 aa18■□□□□ 0.47
TSKU-204ENST00000533752 IGLV3-22A0A075B6J6 115 aa17.99■□□□□ 0.47
TSKU-204ENST00000533752 M0R2N6 131 aa17.99■□□□□ 0.47
TSKU-204ENST00000533752 PITPNM1O00562 1244 aa17.99■□□□□ 0.47
TSKU-204ENST00000533752 ADAMTS3O15072 1205 aa17.99■□□□□ 0.47
TSKU-204ENST00000533752 ARP10275 920 aa17.99■□□□□ 0.47
TSKU-204ENST00000533752 BFSP2Q13515 415 aa17.99■□□□□ 0.47
TSKU-204ENST00000533752 CAGE1Q8TC20 777 aa17.99■□□□□ 0.47
TSKU-204ENST00000533752 TBC1D32Q96NH3 1257 aa17.99■□□□□ 0.47
TSKU-204ENST00000533752 HDAC6Q9UBN7 1215 aa17.99■□□□□ 0.47
TSKU-204ENST00000533752 EMSYQ7Z589 1322 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 CCDC194A0A1B0GVG4 234 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 IPO5O00410 1097 aaKnown RBP17.98■□□□□ 0.47
TSKU-204ENST00000533752 GNAT1P11488 350 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 CYP2C9P11712 490 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 CYP2C18P33260 490 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 TRIM29Q14134 588 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 NONOQ15233 471 aaKnown RBP eCLIP17.98■□□□□ 0.475e-10■■■■■ 34.1
TSKU-204ENST00000533752 NPY5RQ15761 445 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 LRIT3Q3SXY7 679 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 PRR16Q569H4 304 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 UTP14CQ5TAP6 766 aaKnown RBP17.98■□□□□ 0.47
TSKU-204ENST00000533752 GDF6Q6KF10 455 aaPredicted RBP17.98■□□□□ 0.47
TSKU-204ENST00000533752 PSRC1Q6PGN9 363 aaPredicted RBP17.98■□□□□ 0.47
TSKU-204ENST00000533752 MOXD1Q6UVY6 613 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 TBCKQ8TEA7 893 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 ZNF577Q9BSK1 485 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 SMARCAD1Q9H4L7 1026 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 AZI2Q9H6S1 392 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms