RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 CAPN12Q6ZSI9 719 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 UNC13DQ70J99 1090 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 RNF169Q8NCN4 708 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 P3H4Q92791 437 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 TDRD3Q9H7E2 651 aaKnown RBP19.12■□□□□ 0.65
PHRF1-205ENST00000533464 PCDHB4Q9Y5E5 795 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 HEXIM1O94992 359 aaKnown RBP19.12■□□□□ 0.65
PHRF1-205ENST00000533464 KAZNQ674X7 775 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 ZNF653Q96CK0 615 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 INO80B-WBP1J3KQ70 363 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 SHC4Q6S5L8 630 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 TTLL6Q8N841 843 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 CAPS2Q9BXY5 557 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 INO80BQ9C086 356 aaPredicted RBP19.12■□□□□ 0.65
PHRF1-205ENST00000533464 EPB41L5Q9HCM4 733 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 ADAMTS1Q9UHI8 967 aa19.12■□□□□ 0.65
PHRF1-205ENST00000533464 SFI1A8K8P3 1242 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 RNF8O76064 485 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 PRR29P0C7W0 189 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 ZNF131P52739 623 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 BCAS4Q8TDM0 211 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 CDHR1Q96JP9 859 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 THAP12O43422 761 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 AP3B2Q13367 1082 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 GRM4Q14833 912 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 SUPT20HL1Q3ZLR7 823 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 KCTD16Q68DU8 428 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 PODNQ7Z5L7 613 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 PARD6BQ9BYG5 372 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 PCDHA13Q9Y5I0 950 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 SERPING1P05155 500 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 ADRA2BP18089 450 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 GUCY1A2P33402 732 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 PPFIBP2Q8ND30 876 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 UBE2TQ9NPD8 197 aaPredicted RBP19.11■□□□□ 0.65
PHRF1-205ENST00000533464 PRCPP42785 496 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 MXI1P50539 228 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 PDLIM2Q96JY6 352 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
PHRF1-205ENST00000533464 ATP11AP98196 1134 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 BFSP1Q12934 665 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 LLGL1Q15334 1064 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 ZNF341Q9BYN7 854 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 IL25Q9H293 177 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 PCDHA6Q9UN73 950 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 PCDHA8Q9Y5H6 950 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 PASKQ96RG2 1323 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 OVOS2A0A0G2JMS6 1433 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 USP17L10C9JJH3 530 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 ASNSP08243 561 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 HOXA7P31268 230 aaPredicted RBP19.1■□□□□ 0.65
PHRF1-205ENST00000533464 CCDC144BQ3MJ40 725 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 SMIM5Q71RC9 77 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 TAB3Q8N5C8 712 aaPredicted RBP19.1■□□□□ 0.65
PHRF1-205ENST00000533464 PIGOQ8TEQ8 1089 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 DCAF4Q8WV16 495 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 BPIFA3Q9BQP9 254 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 ADD3Q9UEY8 706 aaKnown RBP19.1■□□□□ 0.65
PHRF1-205ENST00000533464 PTPN22Q9Y2R2 807 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 CCDC151A5D8V7 595 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 ATF2P15336 505 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 TXNRD1Q16881 649 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 CIAPIN1Q6FI81 312 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 RNF40O75150 1001 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 C2orf54Q08AI8 447 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 RTKN2Q8IZC4 609 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 SPC25Q9HBM1 224 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 DLC1Q96QB1 1528 aa19.1■□□□□ 0.65
PHRF1-205ENST00000533464 PGRMC1O00264 195 aaKnown RBP19.09■□□□□ 0.65
PHRF1-205ENST00000533464 ATP8B1O43520 1251 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 MIS18BP1Q6P0N0 1132 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 SMC1BQ8NDV3 1235 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 NACA2Q9H009 215 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 TMEM260Q9NX78 707 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 BARHL2Q9NY43 387 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 NEXMIFQ5QGS0 1516 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 I3L4J1 428 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 ORC4O43929 436 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 NFIXQ14938 502 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 GPR162Q16538 588 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 MTERF2Q49AM1 385 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 PPP4R3CPQ6ZMV5 832 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 FOXN1O15353 648 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 TFDP1Q14186 410 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 RIOK1Q9BRS2 568 aaKnown RBP19.09■□□□□ 0.65
PHRF1-205ENST00000533464 TYW1Q9NV66 732 aaKnown RBP19.09■□□□□ 0.65
PHRF1-205ENST00000533464 ODF2LQ9ULJ1 636 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 CIB2O75838 187 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 MIS12Q9H081 205 aa19.09■□□□□ 0.65
PHRF1-205ENST00000533464 PP2D1A8MPX8 630 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 LGALS16A8MUM7 142 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 CAPN9O14815 690 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 CSF1RP07333 972 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 MAPK4P31152 587 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 GPSM2P81274 684 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 NEDD9Q14511 834 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 TOGARAM2Q6ZUX3 1019 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 EEPD1Q7L9B9 569 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 GABPB2Q8TAK5 448 aaPredicted RBP19.08■□□□□ 0.65
PHRF1-205ENST00000533464 DAAM1Q9Y4D1 1078 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms