RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
TRAPPC4-213ENST00000533149 GPAA1O43292 621 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 BMPR1AP36894 532 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 THPOP40225 353 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 NDUFV1P49821 464 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 KIAA0753Q2KHM9 967 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 ASCL5Q7RTU5 278 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 IL17RAQ96F46 866 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 MSLNLQ96KJ4 702 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 IFIH1Q9BYX4 1025 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 NACAP1Q9BZK3 213 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 RBM8AQ9Y5S9 174 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 CFAP54Q96N23 3096 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 MYH7P12883 1935 aa13.14□□□□□ -0.31
TRAPPC4-213ENST00000533149 PRR23AA6NEV1 266 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 HAS3O00219 553 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 GRM6O15303 877 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 F2P00734 622 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 HSPA4P34932 840 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 COASYQ13057 564 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 NECTIN1Q15223 517 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 LY6KQ17RY6 165 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 SYDE2Q5VT97 1194 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 SEPT14Q6ZU15 432 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 WNT8BQ93098 351 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 EMID1Q96A84 441 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 ASIC4Q96FT7 647 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 KIF2CQ99661 725 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 DSCC1Q9BVC3 393 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 EPB41L4AQ9HCS5 686 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 RALGAPA2Q2PPJ7 1873 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 PATL2C9JE40 543 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 LINC01565O15544 149 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 MMP1P03956 469 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 HSPD1P10809 573 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 SLC16A2P36021 539 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 NBL1P41271 181 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 LAMC2Q13753 1193 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 SERINC5Q86VE9 423 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 IFNL3Q8IZI9 196 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 SMRP1Q8NCR6 262 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 RGS22Q8NE09 1264 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 APBB2Q92870 758 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 PHF7Q9BWX1 381 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 PLVAPQ9BX97 442 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 MAF1Q9H063 256 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 MTMR7Q9Y216 660 aa13.13□□□□□ -0.31
TRAPPC4-213ENST00000533149 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 NLRC5Q86WI3 1866 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 TSPY2A6NKD2 308 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 CAND2O75155 1236 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 KDM4AO75164 1064 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 ICAM3P32942 547 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 GTF2F1P35269 517 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 ANAPC15P60006 121 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 ZNF200P98182 395 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 TTBK2Q6IQ55 1244 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 PPTC7Q8NI37 304 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 KCNB2Q92953 911 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 IL17RBQ9NRM6 502 aa13.12□□□□□ -0.31
TRAPPC4-213ENST00000533149 PTPRZ1P23471 2315 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 PLXNA3P51805 1871 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 SLC27A2O14975 620 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 FOXP2O15409 715 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 PPFIA4O75335 1185 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 ZNF286BP0CG31 522 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 PPARAQ07869 468 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 STXBP2Q15833 593 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 MCTP2Q6DN12 878 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 RASGRP2Q7LDG7 609 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 NSUN6Q8TEA1 469 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 CLP1Q92989 425 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 INCENPQ9NQS7 918 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 CLEC1BQ9P126 229 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
TRAPPC4-213ENST00000533149 WDR19Q8NEZ3 1342 aa13.1□□□□□ -0.31
TRAPPC4-213ENST00000533149 FGAP02671 866 aa13.1□□□□□ -0.31
TRAPPC4-213ENST00000533149 ATF7P17544 494 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-213ENST00000533149 ALX1Q15699 326 aa13.1□□□□□ -0.31
TRAPPC4-213ENST00000533149 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
TRAPPC4-213ENST00000533149 RNF20Q5VTR2 975 aa13.1□□□□□ -0.31
TRAPPC4-213ENST00000533149 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
TRAPPC4-213ENST00000533149 RIPOR3Q96MK2 946 aa13.1□□□□□ -0.31
TRAPPC4-213ENST00000533149 NAPBQ9H115 298 aa13.1□□□□□ -0.31
TRAPPC4-213ENST00000533149 USP15Q9Y4E8 981 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms