RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 INTS4Q96HW7 963 aaKnown RBP28.21■■■□□ 2.11
USP48-214ENST00000532737 SPATA33Q96N06 139 aa28.21■■■□□ 2.11
USP48-214ENST00000532737 FOXD4L1Q9NU39 408 aa28.21■■■□□ 2.11
USP48-214ENST00000532737 MYH7BA7E2Y1 1941 aa28.21■■■□□ 2.11
USP48-214ENST00000532737 A0A1W2PQ45 241 aaPredicted RBP28.2■■■□□ 2.1
USP48-214ENST00000532737 A0A1W2PQY0 241 aa28.2■■■□□ 2.1
USP48-214ENST00000532737 ZEB2O60315 1214 aa28.2■■■□□ 2.1
USP48-214ENST00000532737 MMP3P08254 477 aa28.2■■■□□ 2.1
USP48-214ENST00000532737 HSDL1Q3SXM5 330 aa28.2■■■□□ 2.1
USP48-214ENST00000532737 BRDTQ58F21 947 aaPredicted RBP28.2■■■□□ 2.1
USP48-214ENST00000532737 METTL7BQ6UX53 244 aa28.2■■■□□ 2.1
USP48-214ENST00000532737 PPTC7Q8NI37 304 aa28.2■■■□□ 2.1
USP48-214ENST00000532737 UIMC1Q96RL1 719 aa28.2■■■□□ 2.1
USP48-214ENST00000532737 TELO2Q9Y4R8 837 aa28.2■■■□□ 2.1
USP48-214ENST00000532737 CYP3A7-CYP3A51PA0A087WV96 503 aa28.19■■■□□ 2.1
USP48-214ENST00000532737 MYL3P08590 195 aa28.19■■■□□ 2.1
USP48-214ENST00000532737 CYP3A7P24462 503 aa28.19■■■□□ 2.1
USP48-214ENST00000532737 LETM2Q2VYF4 491 aa28.19■■■□□ 2.1
USP48-214ENST00000532737 NEK8Q86SG6 692 aa28.19■■■□□ 2.1
USP48-214ENST00000532737 GIMAP8Q8ND71 665 aaPredicted RBP28.19■■■□□ 2.1
USP48-214ENST00000532737 MBOAT7Q96N66 472 aa28.19■■■□□ 2.1
USP48-214ENST00000532737 FOXP1Q9H334 677 aaPredicted RBP28.19■■■□□ 2.1
USP48-214ENST00000532737 SZT2Q5T011 3432 aa28.18■■■□□ 2.1
USP48-214ENST00000532737 ATN1P54259 1190 aaPredicted RBP28.18■■■□□ 2.1
USP48-214ENST00000532737 ITGB3BPQ13352 177 aaPredicted RBP28.18■■■□□ 2.1
USP48-214ENST00000532737 PRO3102Q9H379 93 aa28.18■■■□□ 2.1
USP48-214ENST00000532737 POLR3EQ9NVU0 708 aa28.18■■■□□ 2.1
USP48-214ENST00000532737 KIF28PB7ZC32 967 aa28.17■■■□□ 2.1
USP48-214ENST00000532737 PURAQ00577 322 aaKnown RBP28.17■■■□□ 2.1
USP48-214ENST00000532737 SETQ01105 290 aaPredicted RBP28.17■■■□□ 2.1
USP48-214ENST00000532737 Q4G0T1 1027 aa28.17■■■□□ 2.1
USP48-214ENST00000532737 LARP1BQ659C4 914 aaKnown RBP28.17■■■□□ 2.1
USP48-214ENST00000532737 MOXD1Q6UVY6 613 aa28.17■■■□□ 2.1
USP48-214ENST00000532737 GLT1D1Q96MS3 346 aa28.17■■■□□ 2.1
USP48-214ENST00000532737 KPNA6O60684 536 aa28.16■■■□□ 2.1
USP48-214ENST00000532737 HOXD8P13378 290 aaPredicted RBP28.16■■■□□ 2.1
USP48-214ENST00000532737 SP4Q02446 784 aa28.16■■■□□ 2.1
USP48-214ENST00000532737 LRRC26Q2I0M4 334 aa28.16■■■□□ 2.1
USP48-214ENST00000532737 SLC39A5Q6ZMH5 540 aa28.16■■■□□ 2.1
USP48-214ENST00000532737 GPR20Q99678 358 aa28.16■■■□□ 2.1
USP48-214ENST00000532737 ZNF577Q9BSK1 485 aa28.16■■■□□ 2.1
USP48-214ENST00000532737 STARD7Q9NQZ5 370 aa28.16■■■□□ 2.1
USP48-214ENST00000532737 NFASCO94856 1347 aa28.16■■■□□ 2.1
USP48-214ENST00000532737 ELP1O95163 1332 aa28.16■■■□□ 2.1
USP48-214ENST00000532737 H3BQV1 296 aa28.15■■■□□ 2.1
USP48-214ENST00000532737 MSH4O15457 936 aa28.15■■■□□ 2.1
USP48-214ENST00000532737 DHX15O43143 795 aaKnown RBP28.15■■■□□ 2.1
USP48-214ENST00000532737 PPFIA4O75335 1185 aa28.15■■■□□ 2.1
USP48-214ENST00000532737 CABYRO75952 493 aa28.15■■■□□ 2.1
USP48-214ENST00000532737 DGKDQ16760 1214 aa28.15■■■□□ 2.1
USP48-214ENST00000532737 VTI1AQ96AJ9 217 aa28.15■■■□□ 2.1
USP48-214ENST00000532737 SDF4Q9BRK5 362 aa28.15■■■□□ 2.1
USP48-214ENST00000532737 MTG1Q9BT17 334 aaPredicted RBP28.15■■■□□ 2.1
USP48-214ENST00000532737 NR2E3Q9Y5X4 410 aa28.15■■■□□ 2.1
USP48-214ENST00000532737 IPO5O00410 1097 aaKnown RBP28.14■■■□□ 2.1
USP48-214ENST00000532737 NOP56O00567 594 aaKnown RBP28.14■■■□□ 2.1
USP48-214ENST00000532737 WNT7AO00755 349 aa28.14■■■□□ 2.1
USP48-214ENST00000532737 SLC37A4O43826 429 aa28.14■■■□□ 2.1
USP48-214ENST00000532737 U2AF2P26368 475 aaKnown RBP eCLIP28.14■■■□□ 2.15e-6■■■□□ 16
USP48-214ENST00000532737 PSMC6P62333 389 aa28.14■■■□□ 2.1
USP48-214ENST00000532737 PPP4R3AQ6IN85 833 aa28.14■■■□□ 2.1
USP48-214ENST00000532737 NOSTRINQ8IVI9 506 aa28.14■■■□□ 2.1
USP48-214ENST00000532737 JPH1Q9HDC5 661 aaPredicted RBP28.14■■■□□ 2.1
USP48-214ENST00000532737 DDX25Q9UHL0 483 aaKnown RBP28.14■■■□□ 2.1
USP48-214ENST00000532737 CCNT1O60563 726 aaKnown RBP28.13■■■□□ 2.09
USP48-214ENST00000532737 GCFC2P16383 781 aaKnown RBP28.13■■■□□ 2.09
USP48-214ENST00000532737 GNL2Q13823 731 aaKnown RBP28.13■■■□□ 2.09
USP48-214ENST00000532737 GRIN2DO15399 1336 aa28.13■■■□□ 2.09
USP48-214ENST00000532737 GSTTP1A0A1W2PQM5 241 aa28.12■■■□□ 2.09
USP48-214ENST00000532737 DDX39AO00148 427 aaKnown RBP28.12■■■□□ 2.09
USP48-214ENST00000532737 SNX17Q15036 470 aa28.12■■■□□ 2.09
USP48-214ENST00000532737 MCTP1Q6DN14 999 aa28.12■■■□□ 2.09
USP48-214ENST00000532737 KAT2BQ92831 832 aa28.12■■■□□ 2.09
USP48-214ENST00000532737 SLC5A5Q92911 643 aa28.12■■■□□ 2.09
USP48-214ENST00000532737 GJA10Q969M2 543 aa28.12■■■□□ 2.09
USP48-214ENST00000532737 NAP1L4Q99733 375 aaKnown RBP28.12■■■□□ 2.09
USP48-214ENST00000532737 TBC1D22BQ9NU19 505 aa28.12■■■□□ 2.09
USP48-214ENST00000532737 SLC9A2Q9UBY0 812 aa28.12■■■□□ 2.09
USP48-214ENST00000532737 DOCK5Q9H7D0 1870 aa28.11■■■□□ 2.09
USP48-214ENST00000532737 ZNF286BP0CG31 522 aa28.11■■■□□ 2.09
USP48-214ENST00000532737 A0A0U1RQG5 324 aaPredicted RBP28.1■■■□□ 2.09
USP48-214ENST00000532737 CCNE2O96020 404 aa28.1■■■□□ 2.09
USP48-214ENST00000532737 ATP2B1P20020 1258 aa28.1■■■□□ 2.09
USP48-214ENST00000532737 PDCP20941 246 aa28.1■■■□□ 2.09
USP48-214ENST00000532737 RTP1P59025 263 aa28.1■■■□□ 2.09
USP48-214ENST00000532737 ITGA7Q13683 1181 aa28.1■■■□□ 2.09
USP48-214ENST00000532737 C1orf53Q5VUE5 145 aa28.1■■■□□ 2.09
USP48-214ENST00000532737 ETNPPLQ8TBG4 499 aa28.1■■■□□ 2.09
USP48-214ENST00000532737 SEPT1Q8WYJ6 367 aa28.1■■■□□ 2.09
USP48-214ENST00000532737 C16orf70Q9BSU1 422 aa28.1■■■□□ 2.09
USP48-214ENST00000532737 ARVCFO00192 962 aa28.09■■■□□ 2.09
USP48-214ENST00000532737 EVI5O60447 810 aa28.09■■■□□ 2.09
USP48-214ENST00000532737 SYT1P21579 422 aa28.09■■■□□ 2.09
USP48-214ENST00000532737 TCF7P36402 384 aaPredicted RBP28.09■■■□□ 2.09
USP48-214ENST00000532737 CDK7P50613 346 aa28.09■■■□□ 2.09
USP48-214ENST00000532737 ACTR2P61160 394 aa28.09■■■□□ 2.09
USP48-214ENST00000532737 TRIM60Q495X7 471 aa28.09■■■□□ 2.09
USP48-214ENST00000532737 UTP14CQ5TAP6 766 aaKnown RBP28.09■■■□□ 2.09
USP48-214ENST00000532737 SLC43A3Q8NBI5 491 aa28.09■■■□□ 2.09
USP48-214ENST00000532737 PPP1R13LQ8WUF5 828 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms