RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ZNF76P36508 570 aa22.64■■□□□ 1.21
CPSF1-209ENST00000532725 NBPF20Q3BBV1 942 aa22.64■■□□□ 1.21
CPSF1-209ENST00000532725 SH3RF1Q7Z6J0 888 aa22.64■■□□□ 1.21
CPSF1-209ENST00000532725 TELO2Q9Y4R8 837 aa22.64■■□□□ 1.21
CPSF1-209ENST00000532725 MROH7Q68CQ1 1323 aa22.63■■□□□ 1.21
CPSF1-209ENST00000532725 IGLV3-22A0A075B6J6 115 aa22.63■■□□□ 1.21
CPSF1-209ENST00000532725 TRIM43BA6NCK2 446 aa22.63■■□□□ 1.21
CPSF1-209ENST00000532725 DCDC2CA8MYV0 355 aa22.63■■□□□ 1.21
CPSF1-209ENST00000532725 USP11P51784 963 aa22.63■■□□□ 1.21
CPSF1-209ENST00000532725 FAM126BQ8IXS8 530 aa22.63■■□□□ 1.21
CPSF1-209ENST00000532725 TRIM43Q96BQ3 446 aaPredicted RBP22.63■■□□□ 1.21
CPSF1-209ENST00000532725 GPR20Q99678 358 aa22.63■■□□□ 1.21
CPSF1-209ENST00000532725 PDLIM7Q9NR12 457 aa22.63■■□□□ 1.21
CPSF1-209ENST00000532725 CD4P01730 458 aa22.62■■□□□ 1.21
CPSF1-209ENST00000532725 CLTBP09497 229 aa22.62■■□□□ 1.21
CPSF1-209ENST00000532725 C16orf70Q9BSU1 422 aa22.62■■□□□ 1.21
CPSF1-209ENST00000532725 AGO4Q9HCK5 861 aaKnown RBP22.62■■□□□ 1.21
CPSF1-209ENST00000532725 PCDH10Q9P2E7 1040 aa22.62■■□□□ 1.21
CPSF1-209ENST00000532725 NFRKBQ6P4R8 1299 aa22.61■■□□□ 1.21
CPSF1-209ENST00000532725 PLA2G4DQ86XP0 818 aa22.61■■□□□ 1.21
CPSF1-209ENST00000532725 OXER1Q8TDS5 423 aa22.61■■□□□ 1.21
CPSF1-209ENST00000532725 TBCKQ8TEA7 893 aa22.61■■□□□ 1.21
CPSF1-209ENST00000532725 TMX3Q96JJ7 454 aa22.61■■□□□ 1.21
CPSF1-209ENST00000532725 PKD2L1Q9P0L9 805 aa22.61■■□□□ 1.21
CPSF1-209ENST00000532725 SCN10AQ9Y5Y9 1956 aa22.61■■□□□ 1.21
CPSF1-209ENST00000532725 HAS3O00219 553 aa22.6■■□□□ 1.21
CPSF1-209ENST00000532725 NOP56O00567 594 aaKnown RBP22.6■■□□□ 1.21
CPSF1-209ENST00000532725 KIAA0355O15063 1070 aa22.6■■□□□ 1.21
CPSF1-209ENST00000532725 F2P00734 622 aa22.6■■□□□ 1.21
CPSF1-209ENST00000532725 MCM2P49736 904 aa22.6■■□□□ 1.21
CPSF1-209ENST00000532725 ITGB3BPQ13352 177 aaPredicted RBP22.6■■□□□ 1.21
CPSF1-209ENST00000532725 PPP1R13LQ8WUF5 828 aa22.6■■□□□ 1.21
CPSF1-209ENST00000532725 TRPV6Q9H1D0 765 aa22.6■■□□□ 1.21
CPSF1-209ENST00000532725 TMEM39AQ9NV64 488 aa22.6■■□□□ 1.21
CPSF1-209ENST00000532725 PRKAG2Q9UGJ0 569 aa22.6■■□□□ 1.21
CPSF1-209ENST00000532725 NFASCO94856 1347 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 GSTTP1A0A1W2PQM5 241 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 ZNF286BP0CG31 522 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 ITGB8P26012 769 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 PTPN11Q06124 597 aaPredicted RBP22.59■■□□□ 1.21
CPSF1-209ENST00000532725 KRT25Q7Z3Z0 450 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 SEPT1Q8WYJ6 367 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 LENG9Q96B70 501 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 GDF15Q99988 308 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 PRO3102Q9H379 93 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 PRDM5Q9NQX1 630 aaPredicted RBP22.59■■□□□ 1.21
CPSF1-209ENST00000532725 TBX21Q9UL17 535 aa22.59■■□□□ 1.21
CPSF1-209ENST00000532725 CYP3A7-CYP3A51PA0A087WV96 503 aa22.58■■□□□ 1.21
CPSF1-209ENST00000532725 TLR3O15455 904 aaKnown RBP22.58■■□□□ 1.21
CPSF1-209ENST00000532725 DHX15O43143 795 aaKnown RBP22.58■■□□□ 1.21
CPSF1-209ENST00000532725 B4GALT4O60513 344 aa22.58■■□□□ 1.21
CPSF1-209ENST00000532725 LGALS2P05162 132 aa22.58■■□□□ 1.21
CPSF1-209ENST00000532725 CYP3A7P24462 503 aa22.58■■□□□ 1.21
CPSF1-209ENST00000532725 PSEN2P49810 448 aa22.58■■□□□ 1.21
CPSF1-209ENST00000532725 HMGN5P82970 282 aaKnown RBP22.58■■□□□ 1.21
CPSF1-209ENST00000532725 SP4Q02446 784 aa22.58■■□□□ 1.21
CPSF1-209ENST00000532725 NONOQ15233 471 aaKnown RBP eCLIP22.58■■□□□ 1.21
CPSF1-209ENST00000532725 PRR16Q569H4 304 aa22.58■■□□□ 1.21
CPSF1-209ENST00000532725 KRT40Q6A162 431 aa22.58■■□□□ 1.21
CPSF1-209ENST00000532725 SESTD1Q86VW0 696 aa22.58■■□□□ 1.21
CPSF1-209ENST00000532725 H3BRB1 525 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 MMP1P03956 469 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 MAGEA10P43363 369 aaPredicted RBP22.57■■□□□ 1.2
CPSF1-209ENST00000532725 CHMP4BP1P59074 171 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 MFSD10Q14728 455 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 KIAA0753Q2KHM9 967 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 CHRDL2Q6WN34 429 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 TNFRSF25Q93038 417 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 SDF4Q9BRK5 362 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 KATNAL1Q9BW62 490 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 TUT1Q9H6E5 874 aaKnown RBP22.57■■□□□ 1.2
CPSF1-209ENST00000532725 JPH1Q9HDC5 661 aaPredicted RBP22.57■■□□□ 1.2
CPSF1-209ENST00000532725 TRMT13Q9NUP7 481 aaKnown RBP22.57■■□□□ 1.2
CPSF1-209ENST00000532725 SLC9A2Q9UBY0 812 aa22.57■■□□□ 1.2
CPSF1-209ENST00000532725 COLQQ9Y215 455 aaPredicted RBP22.57■■□□□ 1.2
CPSF1-209ENST00000532725 DOCK5Q9H7D0 1870 aa22.56■■□□□ 1.2
CPSF1-209ENST00000532725 CCDC194A0A1B0GVG4 234 aa22.56■■□□□ 1.2
CPSF1-209ENST00000532725 IPO5O00410 1097 aaKnown RBP22.56■■□□□ 1.2
CPSF1-209ENST00000532725 KRT2P35908 639 aa22.56■■□□□ 1.2
CPSF1-209ENST00000532725 MDM2Q00987 491 aaPredicted RBP22.56■■□□□ 1.2
CPSF1-209ENST00000532725 SETQ01105 290 aaPredicted RBP22.56■■□□□ 1.2
CPSF1-209ENST00000532725 NR5A1Q13285 461 aa22.56■■□□□ 1.2
CPSF1-209ENST00000532725 INF2Q27J81 1249 aa22.56■■□□□ 1.2
CPSF1-209ENST00000532725 FAM47CQ5HY64 1035 aa22.56■■□□□ 1.2
CPSF1-209ENST00000532725 EARS2Q5JPH6 523 aaKnown RBP22.56■■□□□ 1.2
CPSF1-209ENST00000532725 MBOAT7Q96N66 472 aa22.56■■□□□ 1.2
CPSF1-209ENST00000532725 HDAC6Q9UBN7 1215 aa22.56■■□□□ 1.2
CPSF1-209ENST00000532725 BTBD18B2RXH4 712 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 ATG7O95352 703 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 TIMP1P01033 207 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 SUPT20HL2P0C7V6 817 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 BMP8BP34820 402 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 TCF7P36402 384 aaPredicted RBP22.55■■□□□ 1.2
CPSF1-209ENST00000532725 FOSBP53539 338 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 TRIM29Q14134 588 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 Q4G0T1 1027 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 UTP14CQ5TAP6 766 aaKnown RBP22.55■■□□□ 1.2
CPSF1-209ENST00000532725 MOXD1Q6UVY6 613 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 PIK3AP1Q6ZUJ8 805 aa22.55■■□□□ 1.2
CPSF1-209ENST00000532725 BADQ92934 168 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms