RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 TUT1Q9H6E5 874 aaKnown RBP26.45■■□□□ 1.82
LTBP3-220ENST00000532661 RBM28Q9NW13 759 aaKnown RBP26.45■■□□□ 1.82
LTBP3-220ENST00000532661 CHD7Q9P2D1 2997 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 NBNO60934 754 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 ATP9AO75110 1047 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 TYW1BQ6NUM6 668 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 TRAF7Q6Q0C0 670 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 NLRX1Q86UT6 975 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 FAM217BQ9NTX9 383 aaPredicted RBP26.44■■□□□ 1.82
LTBP3-220ENST00000532661 PCDHA6Q9UN73 950 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 PCDHA8Q9Y5H6 950 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 PCDHA11Q9Y5I1 949 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 TANC1Q9C0D5 1861 aa26.44■■□□□ 1.82
LTBP3-220ENST00000532661 GOLGA8AA7E2F4 631 aa26.43■■□□□ 1.82
LTBP3-220ENST00000532661 GOLGA8BA8MQT2 603 aa26.43■■□□□ 1.82
LTBP3-220ENST00000532661 ITGB5P18084 799 aa26.43■■□□□ 1.82
LTBP3-220ENST00000532661 TCTN1Q2MV58 587 aa26.43■■□□□ 1.82
LTBP3-220ENST00000532661 ZNF618Q5T7W0 954 aa26.43■■□□□ 1.82
LTBP3-220ENST00000532661 TRIM50Q86XT4 487 aa26.43■■□□□ 1.82
LTBP3-220ENST00000532661 USP38Q8NB14 1042 aa26.43■■□□□ 1.82
LTBP3-220ENST00000532661 KCNB2Q92953 911 aa26.43■■□□□ 1.82
LTBP3-220ENST00000532661 SENP7Q9BQF6 1050 aa26.43■■□□□ 1.82
LTBP3-220ENST00000532661 V9GY48 417 aaPredicted RBP26.43■■□□□ 1.82
LTBP3-220ENST00000532661 SMIM10L2AP0DMW4 78 aa26.42■■□□□ 1.82
LTBP3-220ENST00000532661 SMIM10L2BP0DMW5 78 aa26.42■■□□□ 1.82
LTBP3-220ENST00000532661 CDC27P30260 824 aa26.42■■□□□ 1.82
LTBP3-220ENST00000532661 ADGRE1Q14246 886 aa26.42■■□□□ 1.82
LTBP3-220ENST00000532661 UTP14CQ5TAP6 766 aaKnown RBP26.42■■□□□ 1.82
LTBP3-220ENST00000532661 GAS2L1Q99501 681 aaPredicted RBP26.42■■□□□ 1.82
LTBP3-220ENST00000532661 NAP1L2Q9ULW6 460 aaPredicted RBP26.42■■□□□ 1.82
LTBP3-220ENST00000532661 SNX14Q9Y5W7 946 aa26.42■■□□□ 1.82
LTBP3-220ENST00000532661 TET1Q8NFU7 2136 aa26.42■■□□□ 1.82
LTBP3-220ENST00000532661 TRIP12Q14669 1992 aaPredicted RBP26.42■■□□□ 1.82
LTBP3-220ENST00000532661 GBF1Q92538 1859 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 C17orf102A2RUQ5 167 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 SPDYE3A6NKU9 549 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 HMGB1P09429 215 aaKnown RBP26.41■■□□□ 1.82
LTBP3-220ENST00000532661 HSPA4P34932 840 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 MBTPS1Q14703 1052 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 PPP2R2DQ66LE6 453 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 SERINC5Q86VE9 423 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 GPRASP2Q96D09 838 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 JAKMIP1Q96N16 626 aaKnown RBP26.41■■□□□ 1.82
LTBP3-220ENST00000532661 SLC9A7Q96T83 725 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 USP26Q9BXU7 913 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 RNPEPQ9H4A4 650 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 UBIAD1Q9Y5Z9 338 aa26.41■■□□□ 1.82
LTBP3-220ENST00000532661 TREHO43280 583 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 CXCL10P02778 98 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 KCNA2P16389 499 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 HOXC8P31273 242 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 NAPAP54920 295 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 APOBRQ0VD83 1088 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 Q6ZUG5 572 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 PHOSPHO2Q8TCD6 241 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 ATP6V0A1Q93050 837 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 PGBD1Q96JS3 809 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 PKD2L1Q9P0L9 805 aa26.4■■□□□ 1.82
LTBP3-220ENST00000532661 BAIAP3O94812 1187 aa26.39■■□□□ 1.82
LTBP3-220ENST00000532661 CA3P07451 260 aa26.39■■□□□ 1.82
LTBP3-220ENST00000532661 ADD1P35611 737 aaKnown RBP26.39■■□□□ 1.82
LTBP3-220ENST00000532661 FGD1P98174 961 aa26.39■■□□□ 1.82
LTBP3-220ENST00000532661 TMCO2Q7Z6W1 182 aaPredicted RBP26.39■■□□□ 1.82
LTBP3-220ENST00000532661 HERC6Q8IVU3 1022 aa26.39■■□□□ 1.82
LTBP3-220ENST00000532661 PPM1EQ8WY54 764 aa26.39■■□□□ 1.82
LTBP3-220ENST00000532661 SETD4Q9NVD3 440 aa26.39■■□□□ 1.82
LTBP3-220ENST00000532661 DOCK5Q9H7D0 1870 aa26.38■■□□□ 1.81
LTBP3-220ENST00000532661 STXBP3O00186 592 aa26.38■■□□□ 1.81
LTBP3-220ENST00000532661 PARNO95453 639 aaKnown RBP26.38■■□□□ 1.81
LTBP3-220ENST00000532661 THPOP40225 353 aa26.38■■□□□ 1.81
LTBP3-220ENST00000532661 WDR5P61964 334 aaKnown RBP26.38■■□□□ 1.81
LTBP3-220ENST00000532661 MTMR1Q13613 665 aa26.38■■□□□ 1.81
LTBP3-220ENST00000532661 CNKSR3Q6P9H4 555 aa26.38■■□□□ 1.81
LTBP3-220ENST00000532661 RIC8AQ9NPQ8 531 aa26.38■■□□□ 1.81
LTBP3-220ENST00000532661 JADE2Q9NQC1 790 aa26.38■■□□□ 1.81
LTBP3-220ENST00000532661 ARHGEF15O94989 841 aa26.37■■□□□ 1.81
LTBP3-220ENST00000532661 IGFBP4P22692 258 aa26.37■■□□□ 1.81
LTBP3-220ENST00000532661 GIMAP8Q8ND71 665 aaPredicted RBP26.37■■□□□ 1.81
LTBP3-220ENST00000532661 BRF1Q92994 677 aa26.37■■□□□ 1.81
LTBP3-220ENST00000532661 CDHR1Q96JP9 859 aa26.37■■□□□ 1.81
LTBP3-220ENST00000532661 TMEM260Q9NX78 707 aa26.37■■□□□ 1.81
LTBP3-220ENST00000532661 GSTTP1A0A1W2PQM5 241 aa26.36■■□□□ 1.81
LTBP3-220ENST00000532661 SMCO2A6NFE2 343 aa26.36■■□□□ 1.81
LTBP3-220ENST00000532661 TCF7P36402 384 aaPredicted RBP26.36■■□□□ 1.81
LTBP3-220ENST00000532661 KCNJ6P48051 423 aa26.36■■□□□ 1.81
LTBP3-220ENST00000532661 DEFB103AP81534 67 aa26.36■■□□□ 1.81
LTBP3-220ENST00000532661 PPP1R18Q6NYC8 613 aa26.36■■□□□ 1.81
LTBP3-220ENST00000532661 BLOC1S2Q6QNY1 142 aa26.36■■□□□ 1.81
LTBP3-220ENST00000532661 CYP2W1Q8TAV3 490 aa26.36■■□□□ 1.81
LTBP3-220ENST00000532661 CERS4Q9HA82 394 aa26.36■■□□□ 1.81
LTBP3-220ENST00000532661 BARHL2Q9NY43 387 aa26.36■■□□□ 1.81
LTBP3-220ENST00000532661 ZNF215Q9UL58 517 aaPredicted RBP26.36■■□□□ 1.81
LTBP3-220ENST00000532661 RSPH10B2B2RC85 870 aa26.35■■□□□ 1.81
LTBP3-220ENST00000532661 RSPH10BP0C881 870 aa26.35■■□□□ 1.81
LTBP3-220ENST00000532661 METAP2P50579 478 aaKnown RBP eCLIP26.35■■□□□ 1.81
LTBP3-220ENST00000532661 ADCY7P51828 1080 aa26.35■■□□□ 1.81
LTBP3-220ENST00000532661 RCAN1P53805 252 aa26.35■■□□□ 1.81
LTBP3-220ENST00000532661 SEPT1Q8WYJ6 367 aa26.35■■□□□ 1.81
LTBP3-220ENST00000532661 COL25A1Q9BXS0 654 aaPredicted RBP26.35■■□□□ 1.81
LTBP3-220ENST00000532661 PRDM6Q9NQX0 595 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms