RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RTEL1Q9NZ71 1219 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CTTNBP2NLQ9P2B4 639 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 ABCC6O95255 1503 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 EGFRP00533 1210 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CCND1P24385 295 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 SLC16A2P36021 539 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 RASSF2P50749 326 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 SP4Q02446 784 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 PTGISQ16647 500 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 USH1GQ495M9 461 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 KRI1Q8N9T8 703 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 STAMBPL1Q96FJ0 436 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 TRIM47Q96LD4 638 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 NMRK2Q9NPI5 230 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 C15orf41Q9Y2V0 281 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 PCDHA5Q9Y5H7 936 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CEP350Q5VT06 3117 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 hCG_2014768A0A024R1R8 64 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 SORBS3O60504 671 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 ZFXP17010 805 aaPredicted RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 HDLBPQ00341 1268 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 POSTNQ15063 836 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CERKLQ49MI3 558 aaPredicted RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 RSBN1LQ6PCB5 846 aaPredicted RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 GADL1Q6ZQY3 521 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 YTHDF3Q7Z739 585 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CROCCP2Q86T23 111 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CERS5Q8N5B7 392 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 MYCBPAPQ8TBZ2 947 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CYFIP2Q96F07 1278 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 WRNIP1Q96S55 665 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 GLIS2Q9BZE0 524 aaPredicted RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 GOLPH3LQ9H4A5 285 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 MRPL44Q9H9J2 332 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 GPR108Q9NPR9 543 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 HELLSQ9NRZ9 838 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 TCEAL9Q9UHQ7 104 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 ANKRD26Q9UPS8 1709 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 NFKBIEO00221 500 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 GH2P01242 217 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 YY1P25490 414 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 METAP2P50579 478 aaKnown RBP eCLIP7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 PLCD1P51178 756 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 ZMYM1Q5SVZ6 1142 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 PHLDB3Q6NSJ2 640 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 ZFPM1Q8IX07 1006 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 DPF2Q92785 391 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 KIFC2Q96AC6 838 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 FAXDC2Q96IV6 333 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 STRBPQ96SI9 672 aaKnown RBP7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 UBXN6Q9BZV1 441 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 EHD4Q9H223 541 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 POLD4Q9HCU8 107 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 KCNK9Q9NPC2 374 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 PKD2L1Q9P0L9 805 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 KLHL14Q9P2G3 628 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 ADM5C9JUS6 153 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 E7EWF7 191 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 HOXA10P31260 410 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 SLC7A5Q01650 507 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 TBC1D8BQ0IIM8 1120 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 ZBTB17Q13105 803 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 MTF1Q14872 753 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 CDC42EP5Q6NZY7 148 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 HEATR3Q7Z4Q2 680 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 FMR1NBQ8N0W7 255 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 BICD1Q96G01 975 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 OTUD5Q96G74 571 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 ATP6V1G3Q96LB4 118 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 CNOT10Q9H9A5 744 aaKnown RBP7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 EPB41L5Q9HCM4 733 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 MYOZ2Q9NPC6 264 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 TSKSQ9UJT2 592 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 CSADQ9Y600 493 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 UBE2Q2LH0YL09 131 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 HEXIM1O94992 359 aaKnown RBP7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 COG7P83436 770 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 CRY2Q49AN0 593 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 STRIP1Q5VSL9 837 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 TCERG1LQ5VWI1 586 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 KLHL7Q8IXQ5 586 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 CCDC65Q8IXS2 484 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 DEFB129Q9H1M3 183 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 TMEM165Q9HC07 324 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 PLCB1Q9NQ66 1216 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 INTS9Q9NV88 658 aaKnown RBP7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 TAB2Q9NYJ8 693 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 SERPINB13Q9UIV8 391 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 HACL1Q9UJ83 578 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 KCPQ6ZWJ8 1503 aa7.41□□□□□ -1.22
TGFBR3-209ENST00000532540 PLCH1Q4KWH8 1693 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 YDJCA8MPS7 323 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 ZBTB43O43298 467 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 OPHN1O60890 802 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 CNGA1P29973 690 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 SCTRP47872 440 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 PSMD7P51665 324 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 RNASE9P60153 205 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 KIAA0753Q2KHM9 967 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms