RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 DOCK3Q8IZD9 2030 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 MAFGO15525 162 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 EIF3JO75822 258 aaKnown RBP14.22□□□□□ -0.13
COPB1-208ENST00000532088 PKP1Q13835 747 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 INF2Q27J81 1249 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 EARS2Q5JPH6 523 aaKnown RBP14.22□□□□□ -0.13
COPB1-208ENST00000532088 MYSM1Q5VVJ2 828 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 OTOP1Q7RTM1 612 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 ANKK1Q8NFD2 765 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 TINF2Q9BSI4 451 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 GABRQQ9UN88 632 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 ZDHHC9Q9Y397 364 aa14.22□□□□□ -0.13
COPB1-208ENST00000532088 LRRC37A2A6NM11 1700 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 BMP15O95972 392 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 CYP2B6P20813 491 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 SETQ01105 290 aaPredicted RBP14.21□□□□□ -0.13
COPB1-208ENST00000532088 PKN2Q16513 984 aaKnown RBP14.21□□□□□ -0.13
COPB1-208ENST00000532088 GNPTABQ3T906 1256 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 Q4G0T1 1027 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 KCNV1Q6PIU1 500 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 ARMCX2Q7L311 632 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 WNT2BQ93097 391 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 GPRASP2Q96D09 838 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 CDHR1Q96JP9 859 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 PGBD1Q96JS3 809 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 INPP4AQ96PE3 977 aaPredicted RBP14.21□□□□□ -0.13
COPB1-208ENST00000532088 PURBQ96QR8 312 aaKnown RBP14.21□□□□□ -0.13
COPB1-208ENST00000532088 VTA1Q9NP79 307 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 UBIAD1Q9Y5Z9 338 aa14.21□□□□□ -0.13
COPB1-208ENST00000532088 MORC2Q9Y6X9 1032 aaPredicted RBP14.21□□□□□ -0.13
COPB1-208ENST00000532088 MYH7BA7E2Y1 1941 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 MEIS1O00470 390 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 EDIL3O43854 480 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 SSTR3P32745 418 aaPredicted RBP14.2□□□□□ -0.14
COPB1-208ENST00000532088 ICAM3P32942 547 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 MRPS9P82933 396 aaKnown RBP14.2□□□□□ -0.14
COPB1-208ENST00000532088 CEP55Q53EZ4 464 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 MFSD14CQ5VZR4 134 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 NLRX1Q86UT6 975 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 FERMT3Q86UX7 667 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 SPNS2Q8IVW8 549 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 IL31RAQ8NI17 732 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 RAET1EQ8TD07 263 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 LRCH3Q96II8 777 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 MXRA8Q9BRK3 442 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 ABHD16BQ9H3Z7 469 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 JADE2Q9NQC1 790 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 PRDM10Q9NQV6 1147 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.2□□□□□ -0.14
COPB1-208ENST00000532088 TRIM17Q9Y577 477 aa14.2□□□□□ -0.14
COPB1-208ENST00000532088 IGLV3-22A0A075B6J6 115 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 RBM47A0AV96 593 aaKnown RBP14.19□□□□□ -0.14
COPB1-208ENST00000532088 LAD1O00515 517 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 TBX3O15119 743 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 TGFB3P10600 412 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 ZNF76P36508 570 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 TOB1P50616 345 aaPredicted RBP14.19□□□□□ -0.14
COPB1-208ENST00000532088 LBX1P52954 281 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 LETM2Q2VYF4 491 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 TTC38Q5R3I4 469 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 CTU1Q7Z7A3 348 aaKnown RBP14.19□□□□□ -0.14
COPB1-208ENST00000532088 ZNF396Q96N95 335 aaPredicted RBP14.19□□□□□ -0.14
COPB1-208ENST00000532088 KATNBL1Q9H079 304 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.19□□□□□ -0.14
COPB1-208ENST00000532088 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 PTPN22Q9Y2R2 807 aa14.19□□□□□ -0.14
COPB1-208ENST00000532088 FAM86B1E9PN63 330 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 FIBPO43427 364 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 ADCY3O60266 1144 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 CCNT1O60563 726 aaKnown RBP14.18□□□□□ -0.14
COPB1-208ENST00000532088 SNAI1O95863 264 aaPredicted RBP14.18□□□□□ -0.14
COPB1-208ENST00000532088 HMGCRP04035 888 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 FAM86B2P0C5J1 330 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 MYCLP12524 364 aaPredicted RBP14.18□□□□□ -0.14
COPB1-208ENST00000532088 ITGB5P18084 799 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 TRIB2Q92519 343 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 POLR3EQ9NVU0 708 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 FLRT1Q9NZU1 646 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 DDX25Q9UHL0 483 aaKnown RBP14.18□□□□□ -0.14
COPB1-208ENST00000532088 CNPY2Q9Y2B0 182 aa14.18□□□□□ -0.14
COPB1-208ENST00000532088 MYH15Q9Y2K3 1946 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 CEP350Q5VT06 3117 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 RGS20O76081 388 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 NASPP49321 788 aaPredicted RBP14.17□□□□□ -0.14
COPB1-208ENST00000532088 UBXN2AP68543 259 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 MTMR1Q13613 665 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 ACVR2BQ13705 512 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 CCL14Q16627 93 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 LENG9Q96B70 501 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 FAM20AQ96MK3 541 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 SENP7Q9BQF6 1050 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 CFAP45Q9UL16 551 aa14.17□□□□□ -0.14
COPB1-208ENST00000532088 DDX11L8A8MPP1 907 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 SPATA31C2B4DYI2 1134 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 NKRFO15226 690 aaKnown RBP eCLIP14.16□□□□□ -0.14
COPB1-208ENST00000532088 NEMFO60524 1076 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 TDP2O95551 362 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 ZNF865P0CJ78 1059 aaPredicted RBP14.16□□□□□ -0.14
COPB1-208ENST00000532088 GRK4P32298 578 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 PRPHP41219 470 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms