RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 FBXO18Q8NFZ0 1043 aa23.63■■□□□ 1.37
CCS-207ENST00000531990 AGO4Q9HCK5 861 aaKnown RBP23.63■■□□□ 1.37
CCS-207ENST00000531990 NR2E3Q9Y5X4 410 aa23.63■■□□□ 1.37
CCS-207ENST00000531990 IGLV3-22A0A075B6J6 115 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 BTBD18B2RXH4 712 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 K7ELQ4 463 aaPredicted RBP23.62■■□□□ 1.37
CCS-207ENST00000531990 GJB2P29033 226 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 RTP1P59025 263 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 NR5A1Q13285 461 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 CUL4AQ13619 759 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 GNL2Q13823 731 aaKnown RBP23.62■■□□□ 1.37
CCS-207ENST00000531990 SNX17Q15036 470 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 HSDL1Q3SXM5 330 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 PRR16Q569H4 304 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 C1orf53Q5VUE5 145 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 NEK8Q86SG6 692 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 HSCBQ8IWL3 235 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 SNX21Q969T3 373 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 SEZ6LQ9BYH1 1024 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 ATP11BQ9Y2G3 1177 aa23.62■■□□□ 1.37
CCS-207ENST00000531990 NFASCO94856 1347 aa23.61■■□□□ 1.37
CCS-207ENST00000531990 SP4Q02446 784 aa23.61■■□□□ 1.37
CCS-207ENST00000531990 MOXD1Q6UVY6 613 aa23.61■■□□□ 1.37
CCS-207ENST00000531990 NAP1L4Q99733 375 aaKnown RBP23.61■■□□□ 1.37
CCS-207ENST00000531990 ZNF577Q9BSK1 485 aa23.61■■□□□ 1.37
CCS-207ENST00000531990 BCAS3Q9H6U6 928 aa23.61■■□□□ 1.37
CCS-207ENST00000531990 JPH1Q9HDC5 661 aaPredicted RBP23.61■■□□□ 1.37
CCS-207ENST00000531990 MROH7Q68CQ1 1323 aa23.6■■□□□ 1.37
CCS-207ENST00000531990 ARVCFO00192 962 aa23.6■■□□□ 1.37
CCS-207ENST00000531990 IPO5O00410 1097 aaKnown RBP23.6■■□□□ 1.37
CCS-207ENST00000531990 ITGA7Q13683 1181 aa23.6■■□□□ 1.37
CCS-207ENST00000531990 LETM2Q2VYF4 491 aa23.6■■□□□ 1.37
CCS-207ENST00000531990 C7orf61Q8IZ16 206 aa23.6■■□□□ 1.37
CCS-207ENST00000531990 TCEAL9Q9UHQ7 104 aa23.6■■□□□ 1.37
CCS-207ENST00000531990 CYP3A7-CYP3A51PA0A087WV96 503 aa23.59■■□□□ 1.37
CCS-207ENST00000531990 HOXD8P13378 290 aaPredicted RBP23.59■■□□□ 1.37
CCS-207ENST00000531990 GCFC2P16383 781 aaKnown RBP23.59■■□□□ 1.37
CCS-207ENST00000531990 CYP3A7P24462 503 aa23.59■■□□□ 1.37
CCS-207ENST00000531990 PSMC6P62333 389 aa23.59■■□□□ 1.37
CCS-207ENST00000531990 TRIM60Q495X7 471 aa23.59■■□□□ 1.37
CCS-207ENST00000531990 TNFRSF25Q93038 417 aa23.59■■□□□ 1.37
CCS-207ENST00000531990 GPR20Q99678 358 aa23.59■■□□□ 1.37
CCS-207ENST00000531990 KATNAL1Q9BW62 490 aa23.59■■□□□ 1.37
CCS-207ENST00000531990 FOXP1Q9H334 677 aaPredicted RBP23.59■■□□□ 1.37
CCS-207ENST00000531990 TBC1D22BQ9NU19 505 aa23.59■■□□□ 1.37
CCS-207ENST00000531990 SLC9A2Q9UBY0 812 aa23.59■■□□□ 1.37
CCS-207ENST00000531990 SCN10AQ9Y5Y9 1956 aa23.58■■□□□ 1.37
CCS-207ENST00000531990 DCDC2CA8MYV0 355 aa23.58■■□□□ 1.37
CCS-207ENST00000531990 H3BQV1 296 aa23.58■■□□□ 1.37
CCS-207ENST00000531990 PQBP1O60828 265 aaKnown RBP23.58■■□□□ 1.37
CCS-207ENST00000531990 TDP2O95551 362 aa23.58■■□□□ 1.37
CCS-207ENST00000531990 CHMP4BP1P59074 171 aa23.58■■□□□ 1.37
CCS-207ENST00000531990 ITGB3BPQ13352 177 aaPredicted RBP23.58■■□□□ 1.37
CCS-207ENST00000531990 Q4G0T1 1027 aa23.58■■□□□ 1.37
CCS-207ENST00000531990 SEPT1Q8WYJ6 367 aa23.58■■□□□ 1.37
CCS-207ENST00000531990 DDX25Q9UHL0 483 aaKnown RBP23.58■■□□□ 1.37
CCS-207ENST00000531990 EDIL3O43854 480 aa23.57■■□□□ 1.36
CCS-207ENST00000531990 CCNT1O60563 726 aaKnown RBP23.57■■□□□ 1.36
CCS-207ENST00000531990 ZNF286BP0CG31 522 aa23.57■■□□□ 1.36
CCS-207ENST00000531990 TLE2Q04725 743 aa23.57■■□□□ 1.36
CCS-207ENST00000531990 PPP4R3AQ6IN85 833 aa23.57■■□□□ 1.36
CCS-207ENST00000531990 LENG9Q96B70 501 aa23.57■■□□□ 1.36
CCS-207ENST00000531990 INTS4Q96HW7 963 aaKnown RBP23.57■■□□□ 1.36
CCS-207ENST00000531990 TOX2Q96NM4 488 aa23.57■■□□□ 1.36
CCS-207ENST00000531990 FAM205CA6NFA0 338 aa23.56■■□□□ 1.36
CCS-207ENST00000531990 DDX39AO00148 427 aaKnown RBP23.56■■□□□ 1.36
CCS-207ENST00000531990 TLR3O15455 904 aaKnown RBP23.56■■□□□ 1.36
CCS-207ENST00000531990 F2P00734 622 aa23.56■■□□□ 1.36
CCS-207ENST00000531990 CDK7P50613 346 aa23.56■■□□□ 1.36
CCS-207ENST00000531990 NBPF20Q3BBV1 942 aa23.56■■□□□ 1.36
CCS-207ENST00000531990 FAM47CQ5HY64 1035 aa23.56■■□□□ 1.36
CCS-207ENST00000531990 EARS2Q5JPH6 523 aaKnown RBP23.56■■□□□ 1.36
CCS-207ENST00000531990 LARP1BQ659C4 914 aaKnown RBP23.56■■□□□ 1.36
CCS-207ENST00000531990 ANKRD33Q7Z3H0 272 aa23.56■■□□□ 1.36
CCS-207ENST00000531990 SLC43A3Q8NBI5 491 aa23.56■■□□□ 1.36
CCS-207ENST00000531990 MBOAT7Q96N66 472 aa23.56■■□□□ 1.36
CCS-207ENST00000531990 PRKAG2Q9UGJ0 569 aa23.56■■□□□ 1.36
CCS-207ENST00000531990 TNRC18O15417 2968 aaPredicted RBP23.55■■□□□ 1.36
CCS-207ENST00000531990 MSH4O15457 936 aa23.55■■□□□ 1.36
CCS-207ENST00000531990 LGALS2P05162 132 aa23.55■■□□□ 1.36
CCS-207ENST00000531990 TCF7P36402 384 aaPredicted RBP23.55■■□□□ 1.36
CCS-207ENST00000531990 PSEN2P49810 448 aa23.55■■□□□ 1.36
CCS-207ENST00000531990 MFSD10Q14728 455 aa23.55■■□□□ 1.36
CCS-207ENST00000531990 UTP14CQ5TAP6 766 aaKnown RBP23.55■■□□□ 1.36
CCS-207ENST00000531990 KAT2BQ92831 832 aa23.55■■□□□ 1.36
CCS-207ENST00000531990 UIMC1Q96RL1 719 aa23.55■■□□□ 1.36
CCS-207ENST00000531990 ZNF215Q9UL58 517 aaPredicted RBP23.55■■□□□ 1.36
CCS-207ENST00000531990 GRIN2DO15399 1336 aa23.55■■□□□ 1.36
CCS-207ENST00000531990 H3BRB1 525 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 GAS7O60861 476 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 PDCP20941 246 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 ACTR2P61160 394 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 PTPN11Q06124 597 aaPredicted RBP23.54■■□□□ 1.36
CCS-207ENST00000531990 KIAA0753Q2KHM9 967 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 MCTP1Q6DN14 999 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 NFRKBQ6P4R8 1299 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 NOSTRINQ8IVI9 506 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 SLC5A5Q92911 643 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 RIT2Q99578 217 aa23.54■■□□□ 1.36
CCS-207ENST00000531990 C16orf70Q9BSU1 422 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms