RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 NGRNQ9NPE2 291 aaKnown RBP6.28□□□□□ -1.4
USP47-211ENST00000531513 TMEFF2Q9UIK5 374 aaPredicted RBP6.28□□□□□ -1.4
USP47-211ENST00000531513 FBXL7Q9UJT9 491 aa6.28□□□□□ -1.4
USP47-211ENST00000531513 TBX1O43435 398 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 BCL6P41182 706 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 ICAM4Q14773 271 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 SURF1Q15526 300 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 RNF187Q5TA31 235 aaPredicted RBP6.27□□□□□ -1.41
USP47-211ENST00000531513 CEP68Q76N32 757 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 PLEKHH3Q7Z736 793 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 DIO2Q92813 273 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 MBD6Q96DN6 1003 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 TRMT2BQ96GJ1 504 aaKnown RBP6.27□□□□□ -1.41
USP47-211ENST00000531513 YTHDC1Q96MU7 727 aaKnown RBP6.27□□□□□ -1.41
USP47-211ENST00000531513 BRINP2Q9C0B6 783 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 ZNF652Q9Y2D9 606 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 TSC22D4Q9Y3Q8 395 aa6.27□□□□□ -1.41
USP47-211ENST00000531513 ARNTLO00327 626 aa6.26□□□□□ -1.41
USP47-211ENST00000531513 CYP1A1P04798 512 aaPredicted RBP6.26□□□□□ -1.41
USP47-211ENST00000531513 IBSPP21815 317 aaPredicted RBP6.26□□□□□ -1.41
USP47-211ENST00000531513 IGBP1P78318 339 aa6.26□□□□□ -1.41
USP47-211ENST00000531513 PLEKHG4Q58EX7 1191 aa6.26□□□□□ -1.41
USP47-211ENST00000531513 E4F1Q66K89 784 aaPredicted RBP6.26□□□□□ -1.41
USP47-211ENST00000531513 IQCEQ6IPM2 695 aa6.26□□□□□ -1.41
USP47-211ENST00000531513 Q8N1X5 172 aa6.26□□□□□ -1.41
USP47-211ENST00000531513 SORCS2Q96PQ0 1159 aa6.26□□□□□ -1.41
USP47-211ENST00000531513 MSRB2Q9Y3D2 182 aa6.26□□□□□ -1.41
USP47-211ENST00000531513 hCG_2014768A0A024R1R8 64 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 MYO1BO43795 1136 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 KCNAB2Q13303 367 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 CRIP3Q6Q6R5 217 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 C6orf15Q6UXA7 325 aaPredicted RBP6.25□□□□□ -1.41
USP47-211ENST00000531513 CELF2-AS1Q8N7Q2 184 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 ARRDC4Q8NCT1 418 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 ZCRB1Q8TBF4 217 aaKnown RBP6.25□□□□□ -1.41
USP47-211ENST00000531513 ZCCHC14Q8WYQ9 949 aaKnown RBP6.25□□□□□ -1.41
USP47-211ENST00000531513 TMEM169Q96HH4 297 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 L2HGDHQ9H9P8 463 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 CD248Q9HCU0 757 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 ACTR10Q9NZ32 417 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 DTLQ9NZJ0 730 aa6.25□□□□□ -1.41
USP47-211ENST00000531513 COA3Q9Y2R0 106 aaPredicted RBP6.25□□□□□ -1.41
USP47-211ENST00000531513 CCDC85CA6NKD9 419 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 GPR42O15529 346 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 MEFVO15553 781 aaPredicted RBP6.24□□□□□ -1.41
USP47-211ENST00000531513 SNRPB2P08579 225 aaKnown RBP6.24□□□□□ -1.41
USP47-211ENST00000531513 IL13P35225 146 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 ECI1P42126 302 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 GTF2A2P52657 109 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 MLLT6P55198 1093 aaPredicted RBP6.24□□□□□ -1.41
USP47-211ENST00000531513 PKN3Q6P5Z2 889 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 TEPPQ6URK8 271 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 FAM178BQ8IXR5 827 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 LILRB2Q8N423 598 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 RCBTB1Q8NDN9 531 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 IGDCC4Q8TDY8 1250 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 TOE1Q96GM8 510 aaKnown RBP6.24□□□□□ -1.41
USP47-211ENST00000531513 CLIC6Q96NY7 704 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 DNAJC7Q99615 494 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 KLC2Q9H0B6 622 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 TMEM168Q9H0V1 697 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 CROTQ9UKG9 612 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 PCDHB4Q9Y5E5 795 aa6.24□□□□□ -1.41
USP47-211ENST00000531513 TCRBV5S2A0A599 114 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 NPEPPSL1A6NEC2 478 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 B2RBV5 119 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 HGSO14964 777 aaPredicted RBP6.23□□□□□ -1.41
USP47-211ENST00000531513 SLPIP03973 132 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 GDF5P43026 501 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 EPHB4P54760 987 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 CHRNA2Q15822 529 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 DDR2Q16832 855 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 PRSS53Q2L4Q9 553 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 ZNF227Q86WZ6 799 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 CIR1Q86X95 450 aaPredicted RBP6.23□□□□□ -1.41
USP47-211ENST00000531513 KREMEN2Q8NCW0 462 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 DNERQ8NFT8 737 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 MICAL1Q8TDZ2 1067 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 SH3TC2Q8TF17 1288 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 ST7Q9NRC1 585 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 IFT57Q9NWB7 429 aa6.23□□□□□ -1.41
USP47-211ENST00000531513 NOP58Q9Y2X3 529 aaKnown RBP6.23□□□□□ -1.41
USP47-211ENST00000531513 PDPK1O15530 556 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 RAB11FIP3O75154 756 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 SCG5P05408 212 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 ITGAVP06756 1048 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 ANAPC15P60006 121 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 IFRD2Q12894 506 aaPredicted RBP6.22□□□□□ -1.41
USP47-211ENST00000531513 RASGRF1Q13972 1273 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 EMC4Q5J8M3 183 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 ACBD5Q5T8D3 534 aaPredicted RBP6.22□□□□□ -1.41
USP47-211ENST00000531513 STEAP3Q658P3 488 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 MRM1Q6IN84 353 aaKnown RBP6.22□□□□□ -1.41
USP47-211ENST00000531513 FILIP1Q7Z7B0 1213 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 PALM2Q8IXS6 379 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 PPIL6Q8IXY8 311 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 KBTBD2Q8IY47 623 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 CDK5RAP1Q96SZ6 601 aaKnown RBP6.22□□□□□ -1.41
USP47-211ENST00000531513 TMX1Q9H3N1 280 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 FANCLQ9NW38 375 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms