RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 MTMR4Q9NYA4 1195 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 SEPT9Q9UHD8 586 aaPredicted RBP9.77□□□□□ -0.85
CD44-232ENST00000531118 EXOC6BQ9Y2D4 811 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 MYH7BA7E2Y1 1941 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 EMSYQ7Z589 1322 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 SPTBN2O15020 2390 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 ZNF292O60281 2723 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 MAP1BP46821 2468 aaKnown RBP9.76□□□□□ -0.85
CD44-232ENST00000531118 MED19A0JLT2 244 aaPredicted RBP9.76□□□□□ -0.85
CD44-232ENST00000531118 NFIBO00712 420 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 PRDM1O75626 825 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 CSPG5O95196 566 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 EDNRBP24530 442 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
CD44-232ENST00000531118 SLC1A4P43007 532 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 NDUFV1P49821 464 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 PTK7Q13308 1070 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 BAATQ14032 418 aaPredicted RBP9.76□□□□□ -0.85
CD44-232ENST00000531118 SBK1Q52WX2 424 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 SMRP1Q8NCR6 262 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 DBF4BQ8NFT6 615 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 CHURC1Q8WUH1 139 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 MSLNLQ96KJ4 702 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.76□□□□□ -0.85
CD44-232ENST00000531118 PAG1Q9NWQ8 432 aa9.76□□□□□ -0.85
CD44-232ENST00000531118 PLXNA4Q9HCM2 1894 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 PTPDC1A2A3K4 754 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 GOLGA8CPA6NN73 597 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 C5orf67F2Z3F1 127 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 C3orf80F5H4A9 247 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 SMAPO00193 183 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 GRM6O15303 877 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 PLA2G6O60733 806 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 KRT37O76014 449 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 EYA4O95677 639 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 ICAM1P05362 532 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 LINC00271P0C7V0 271 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 TXNP10599 105 aaKnown RBP9.75□□□□□ -0.85
CD44-232ENST00000531118 PDE4BQ07343 736 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 PDE4DQ08499 809 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 UBE3CQ15386 1083 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 AFG1LQ8WV93 481 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 CHMP4CQ96CF2 233 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 C11orf84Q9BUA3 381 aaPredicted RBP9.75□□□□□ -0.85
CD44-232ENST00000531118 PUS7LQ9H0K6 701 aaKnown RBP9.75□□□□□ -0.85
CD44-232ENST00000531118 SLC24A3Q9HC58 644 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 EPB41L4AQ9HCS5 686 aaPredicted RBP9.75□□□□□ -0.85
CD44-232ENST00000531118 INCENPQ9NQS7 918 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 HDAC6Q9UBN7 1215 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 PRR12Q9ULL5 1215 aa9.75□□□□□ -0.85
CD44-232ENST00000531118 BAHCC1Q9P281 2608 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 DMXL1Q9Y485 3027 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 IPO8O15397 1037 aaKnown RBP9.74□□□□□ -0.85
CD44-232ENST00000531118 PDGFBP01127 241 aaPredicted RBP9.74□□□□□ -0.85
CD44-232ENST00000531118 MMP1P03956 469 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 CALML3P27482 149 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 ARHGAP1Q07960 439 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 PLEKHG4Q58EX7 1191 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 KCTD1Q719H9 257 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 FRAT1Q92837 279 aaPredicted RBP9.74□□□□□ -0.85
CD44-232ENST00000531118 TOP1MTQ969P6 601 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 IFIH1Q9BYX4 1025 aaKnown RBP9.74□□□□□ -0.85
CD44-232ENST00000531118 RANBP17Q9H2T7 1088 aaKnown RBP9.74□□□□□ -0.85
CD44-232ENST00000531118 IGFLR1Q9H665 355 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 USP15Q9Y4E8 981 aaPredicted RBP9.74□□□□□ -0.85
CD44-232ENST00000531118 ADGRA3Q8IWK6 1321 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 MYH6P13533 1939 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 ZFHX4Q86UP3 3567 aa9.74□□□□□ -0.85
CD44-232ENST00000531118 TTC3P53804 2025 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 OTOGLQ3ZCN5 2332 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.73□□□□□ -0.85
CD44-232ENST00000531118 RCCD1A6NED2 376 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 MINDY4BA8MYZ0 360 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 UPP2O95045 317 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 F2P00734 622 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 GH1P01241 217 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 ZNF286BP0CG31 522 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 MCCP23508 829 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 ICAM3P32942 547 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 RRP1P56182 461 aaKnown RBP9.73□□□□□ -0.85
CD44-232ENST00000531118 COASYQ13057 564 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 ADAM15Q13444 863 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 PTPN21Q16825 1174 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 MCTP2Q6DN12 878 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 CEP85Q6P2H3 762 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 FRMD5Q7Z6J6 570 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 ADSSL1Q8N142 457 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 FIBCD1Q8N539 461 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 C7orf31Q8N865 590 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 NEDD1Q8NHV4 660 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 RHPN1Q8TCX5 695 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 NKD2Q969F2 451 aaPredicted RBP9.73□□□□□ -0.85
CD44-232ENST00000531118 ZFRQ96KR1 1074 aaKnown RBP9.73□□□□□ -0.85
CD44-232ENST00000531118 MPHOSPH6Q99547 160 aaKnown RBP9.73□□□□□ -0.85
CD44-232ENST00000531118 ALG1Q9BT22 464 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 KATNAL1Q9BW62 490 aa9.73□□□□□ -0.85
CD44-232ENST00000531118 PHF7Q9BWX1 381 aaPredicted RBP9.73□□□□□ -0.85
CD44-232ENST00000531118 RC3H2Q9HBD1 1191 aaKnown RBP9.73□□□□□ -0.85
CD44-232ENST00000531118 CLEC1BQ9P126 229 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms