RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 POTEB3A0JP26 581 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 SPDYE3A6NKU9 549 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 FAM196BA6NMK8 535 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 POTECB2RU33 542 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 APBA3O96018 575 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 KIF11P52732 1056 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 SLC12A3P55017 1021 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 SPIRE1Q08AE8 756 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 SMC1AQ14683 1233 aaKnown RBP19.05■□□□□ 0.64
BRCA2-204ENST00000530893 EDRF1Q3B7T1 1238 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 CCDC40Q4G0X9 1142 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 SYDE2Q5VT97 1194 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 POTEBQ6S5H4 581 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 HDXQ7Z353 690 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 ZC3H3Q8IXZ2 948 aaKnown RBP19.05■□□□□ 0.64
BRCA2-204ENST00000530893 GLIS3Q8NEA6 775 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 BAP1Q92560 729 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 CNKSR1Q969H4 720 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 GJA10Q969M2 543 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 IFIH1Q9BYX4 1025 aaKnown RBP19.05■□□□□ 0.64
BRCA2-204ENST00000530893 DEF6Q9H4E7 631 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 RCCD1A6NED2 376 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 NDUFB10O96000 172 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 SLURP2P0DP57 97 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 BMP3P12645 472 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 RPA1P27694 616 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 CIITAP33076 1130 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 GPS2Q13227 327 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
BRCA2-204ENST00000530893 HERC4Q5GLZ8 1057 aaPredicted RBP19.04■□□□□ 0.64
BRCA2-204ENST00000530893 RBM26Q5T8P6 1007 aaKnown RBP19.04■□□□□ 0.64
BRCA2-204ENST00000530893 NCAPH2Q6IBW4 605 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 TANGO6Q9C0B7 1094 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 CEP72Q9P209 647 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 JRKLQ9Y4A0 524 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 PCDHA13Q9Y5I0 950 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 PCDHAC2Q9Y5I4 1007 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 SLX4Q8IY92 1834 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 ATAD5Q96QE3 1844 aa19.04■□□□□ 0.64
BRCA2-204ENST00000530893 LRRC53A6NM62 1247 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 ENC1O14682 589 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 ZNF263O14978 683 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 EPHB6O15197 1021 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 TACC1O75410 805 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 CC2D2BQ6DHV5 1058 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 IQCEQ6IPM2 695 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 PDXDC1Q6P996 788 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 RRAGAQ7L523 313 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 CACNA2D4Q7Z3S7 1137 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 KCTD10Q9H3F6 313 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 ST7Q9NRC1 585 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 EMILIN3Q9NT22 766 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 PIK3CDO00329 1044 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 MED24O75448 989 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 KRT18P05783 430 aaKnown RBP19.03■□□□□ 0.64
BRCA2-204ENST00000530893 PRLRP16471 622 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 CYP27A1Q02318 531 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 TRIM59Q8IWR1 403 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 SUPT20HQ8NEM7 779 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 SH2D4AQ9H788 454 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 HERC5Q9UII4 1024 aaKnown RBP19.03■□□□□ 0.64
BRCA2-204ENST00000530893 L1RE1Q9UN81 338 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 DNM3Q9UQ16 869 aa19.03■□□□□ 0.64
BRCA2-204ENST00000530893 TARSL2A2RTX5 802 aaKnown RBP19.02■□□□□ 0.64
BRCA2-204ENST00000530893 PJA2O43164 708 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 AKR1B10O60218 316 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 CYP3A4P08684 503 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 RHOXF2BP0C7M4 288 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 EIF4A3P38919 411 aaKnown RBP19.02■□□□□ 0.64
BRCA2-204ENST00000530893 KCNMA1Q12791 1236 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 PRR16Q569H4 304 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 CATSPER3Q86XQ3 398 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 SYT2Q8N9I0 419 aaPredicted RBP19.02■□□□□ 0.64
BRCA2-204ENST00000530893 NOA1Q8NC60 698 aaKnown RBP19.02■□□□□ 0.64
BRCA2-204ENST00000530893 SCFD1Q8WVM8 642 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 LENG9Q96B70 501 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 RHOXF2Q9BQY4 288 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 HDAC6Q9UBN7 1215 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 TFR2Q9UP52 801 aa19.02■□□□□ 0.64
BRCA2-204ENST00000530893 EIF3JO75822 258 aaKnown RBP19.01■□□□□ 0.63
BRCA2-204ENST00000530893 GDF11O95390 407 aa19.01■□□□□ 0.63
BRCA2-204ENST00000530893 TFRCP02786 760 aaKnown RBP19.01■□□□□ 0.63
BRCA2-204ENST00000530893 PLEKP08567 350 aaPredicted RBP19.01■□□□□ 0.63
BRCA2-204ENST00000530893 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
BRCA2-204ENST00000530893 SHROOM1Q2M3G4 852 aaPredicted RBP19.01■□□□□ 0.63
BRCA2-204ENST00000530893 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.01■□□□□ 0.63
BRCA2-204ENST00000530893 RBAK-RBAKDNI3L0D1 243 aa19.01■□□□□ 0.63
BRCA2-204ENST00000530893 USP14P54578 494 aa19.01■□□□□ 0.63
BRCA2-204ENST00000530893 VSNL1P62760 191 aa19.01■□□□□ 0.63
BRCA2-204ENST00000530893 ASTE1Q2TB18 679 aaPredicted RBP19.01■□□□□ 0.63
BRCA2-204ENST00000530893 ARSHQ5FYA8 562 aa19.01■□□□□ 0.63
BRCA2-204ENST00000530893 ALS2CR12Q96Q35 445 aa19.01■□□□□ 0.63
BRCA2-204ENST00000530893 LUC7LQ9NQ29 371 aaKnown RBP19.01■□□□□ 0.63
BRCA2-204ENST00000530893 MACROD2A1Z1Q3 448 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 CETN3O15182 167 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 GH2P01242 217 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 OAS2P29728 719 aaKnown RBP19■□□□□ 0.63
BRCA2-204ENST00000530893 ITIH3Q06033 890 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 SLC9C1Q4G0N8 1177 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 KRT26Q7Z3Y9 468 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms