RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SNTG2Q9NY99 539 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 ATP10AO60312 1499 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 SGSM2O43147 1006 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 MC3RP41968 323 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 LIMS1P48059 325 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 IFRD2Q12894 506 aaPredicted RBP10.37□□□□□ -0.75
CSDE1-213ENST00000530784 SOGA3Q5TF21 947 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 KCNT2Q6UVM3 1135 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 LRP10Q7Z4F1 713 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 PHF20Q9BVI0 1012 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 CLDND1Q9NY35 253 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
CSDE1-213ENST00000530784 H7BY64 318 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 NCAM1P13591 858 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 KRTAP19-4Q3LI73 84 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 FOXB2Q5VYV0 432 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 CNKSR3Q6P9H4 555 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 DCAF4Q8WV16 495 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 DACT3Q96B18 629 aaPredicted RBP10.36□□□□□ -0.75
CSDE1-213ENST00000530784 RNF38Q9H0F5 515 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 AP5M1Q9H0R1 490 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 ARHGEF12Q9NZN5 1544 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 CCDC18Q5T9S5 1454 aa10.36□□□□□ -0.75
CSDE1-213ENST00000530784 KDM5CP41229 1560 aa10.35□□□□□ -0.75
CSDE1-213ENST00000530784 FAM153BP0C7A2 387 aa10.35□□□□□ -0.75
CSDE1-213ENST00000530784 HSPA2P54652 639 aa10.35□□□□□ -0.75
CSDE1-213ENST00000530784 RSPO2Q6UXX9 243 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-213ENST00000530784 AMIGO3Q86WK7 504 aa10.35□□□□□ -0.75
CSDE1-213ENST00000530784 ZBTB38Q8NAP3 1195 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-213ENST00000530784 SEC14L1Q92503 715 aa10.35□□□□□ -0.75
CSDE1-213ENST00000530784 SRPK1Q96SB4 655 aaKnown RBP10.35□□□□□ -0.75
CSDE1-213ENST00000530784 CDIP1Q9H305 208 aa10.35□□□□□ -0.75
CSDE1-213ENST00000530784 COA3Q9Y2R0 106 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-213ENST00000530784 ARID1BQ8NFD5 2236 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-213ENST00000530784 KDM2BQ8NHM5 1336 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 CASKIN1Q8WXD9 1431 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 LRRIQ1Q96JM4 1722 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 SLC6A11P48066 632 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 FOXO4P98177 505 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 FAM209AQ5JX71 171 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 SPOCD1Q6ZMY3 1216 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 SIAH1Q8IUQ4 282 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 CDC6Q99741 560 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 PALD1Q9ULE6 856 aa10.34□□□□□ -0.75
CSDE1-213ENST00000530784 SCUBE1Q8IWY4 988 aa10.33□□□□□ -0.76
CSDE1-213ENST00000530784 MKL1Q969V6 931 aa10.33□□□□□ -0.76
CSDE1-213ENST00000530784 PWWP2AQ96N64 755 aa10.33□□□□□ -0.76
CSDE1-213ENST00000530784 DNAJC7Q99615 494 aa10.33□□□□□ -0.76
CSDE1-213ENST00000530784 KRTAP9-9Q9BYP9 154 aa10.33□□□□□ -0.76
CSDE1-213ENST00000530784 KRTAP9-4Q9BYQ2 154 aa10.33□□□□□ -0.76
CSDE1-213ENST00000530784 PPARGC1AQ9UBK2 798 aaKnown RBP10.33□□□□□ -0.76
CSDE1-213ENST00000530784 FAN1Q9Y2M0 1017 aa10.33□□□□□ -0.76
CSDE1-213ENST00000530784 PREX2Q70Z35 1606 aa10.33□□□□□ -0.76
CSDE1-213ENST00000530784 DIP2CQ9Y2E4 1556 aa10.32□□□□□ -0.76
CSDE1-213ENST00000530784 AFF3P51826 1226 aaKnown RBP10.32□□□□□ -0.76
CSDE1-213ENST00000530784 TCERG1LQ5VWI1 586 aa10.32□□□□□ -0.76
CSDE1-213ENST00000530784 STYK1Q6J9G0 422 aa10.32□□□□□ -0.76
CSDE1-213ENST00000530784 MILR1Q7Z6M3 343 aa10.32□□□□□ -0.76
CSDE1-213ENST00000530784 AFAP1Q8N556 730 aa10.32□□□□□ -0.76
CSDE1-213ENST00000530784 JAM3Q9BX67 310 aa10.32□□□□□ -0.76
CSDE1-213ENST00000530784 ABCC1P33527 1531 aa10.32□□□□□ -0.76
CSDE1-213ENST00000530784 REREQ9P2R6 1566 aa10.31□□□□□ -0.76
CSDE1-213ENST00000530784 FYCO1Q9BQS8 1478 aa10.31□□□□□ -0.76
CSDE1-213ENST00000530784 MLH3Q9UHC1 1453 aa10.31□□□□□ -0.76
CSDE1-213ENST00000530784 TRBV23-1A0A0A0MS06 115 aa10.31□□□□□ -0.76
CSDE1-213ENST00000530784 BTBD11A6QL63 1104 aa10.31□□□□□ -0.76
CSDE1-213ENST00000530784 LBX2Q6XYB7 198 aa10.31□□□□□ -0.76
CSDE1-213ENST00000530784 B3GNT8Q7Z7M8 397 aa10.31□□□□□ -0.76
CSDE1-213ENST00000530784 TMEM151BQ8IW70 566 aa10.31□□□□□ -0.76
CSDE1-213ENST00000530784 CPA5Q8WXQ8 436 aa10.31□□□□□ -0.76
CSDE1-213ENST00000530784 GPR85P60893 370 aa10.3□□□□□ -0.76
CSDE1-213ENST00000530784 CACNB2Q08289 660 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-213ENST00000530784 VMACQ2NL98 169 aa10.3□□□□□ -0.76
CSDE1-213ENST00000530784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.3□□□□□ -0.76
CSDE1-213ENST00000530784 EXOC2Q96KP1 924 aa10.3□□□□□ -0.76
CSDE1-213ENST00000530784 DRC1Q96MC2 740 aa10.3□□□□□ -0.76
CSDE1-213ENST00000530784 OSBPL2Q9H1P3 480 aa10.3□□□□□ -0.76
CSDE1-213ENST00000530784 PREX1Q8TCU6 1659 aa10.3□□□□□ -0.76
CSDE1-213ENST00000530784 CDC42BPBQ9Y5S2 1711 aa10.3□□□□□ -0.76
CSDE1-213ENST00000530784 ABCA6Q8N139 1617 aa10.29□□□□□ -0.76
CSDE1-213ENST00000530784 HGSO14964 777 aaPredicted RBP10.29□□□□□ -0.76
CSDE1-213ENST00000530784 DGKIO75912 1065 aa10.29□□□□□ -0.76
CSDE1-213ENST00000530784 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
CSDE1-213ENST00000530784 STEAP3Q658P3 488 aa10.29□□□□□ -0.76
CSDE1-213ENST00000530784 IFNL3Q8IZI9 196 aa10.29□□□□□ -0.76
CSDE1-213ENST00000530784 SMARCC2Q8TAQ2 1214 aa10.29□□□□□ -0.76
CSDE1-213ENST00000530784 IPO9Q96P70 1041 aaKnown RBP10.29□□□□□ -0.76
CSDE1-213ENST00000530784 ZFYVE21Q9BQ24 234 aa10.29□□□□□ -0.76
CSDE1-213ENST00000530784 EPB41L1Q9H4G0 881 aa10.29□□□□□ -0.76
CSDE1-213ENST00000530784 TRAF6Q9Y4K3 522 aa10.29□□□□□ -0.76
CSDE1-213ENST00000530784 TRAPPC8Q9Y2L5 1435 aa10.29□□□□□ -0.76
CSDE1-213ENST00000530784 ITSN2Q9NZM3 1697 aa10.28□□□□□ -0.76
CSDE1-213ENST00000530784 MIB1Q86YT6 1006 aa10.28□□□□□ -0.76
CSDE1-213ENST00000530784 AGLP35573 1532 aa10.28□□□□□ -0.76
CSDE1-213ENST00000530784 UHRF1BP1Q6BDS2 1440 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 TADA3O75528 432 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 SUMO1P63165 101 aaKnown RBP10.27□□□□□ -0.77
CSDE1-213ENST00000530784 CHRNA2Q15822 529 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 LONRF2Q1L5Z9 754 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 KIZQ2M2Z5 673 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms