RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 NHEJ1Q9H9Q4 299 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-227ENST00000530748 MRPL47Q9HD33 250 aaKnown RBP9.2□□□□□ -0.94
CTNND1-227ENST00000530748 FAN1Q9Y2M0 1017 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 ARHGEF37A1IGU5 675 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 MOCS3O95396 460 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 CPP00450 1065 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 SAT1P21673 171 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 CDK8P49336 464 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 ATP1A2P50993 1020 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 EPHB4P54760 987 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 ETF1P62495 437 aaKnown RBP9.19□□□□□ -0.94
CTNND1-227ENST00000530748 RAPH1Q70E73 1250 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 FAM133AQ8N9E0 248 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 KCTD6Q8NC69 237 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 HDAC11Q96DB2 347 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 DYNLL2Q96FJ2 89 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 LRGUKQ96M69 825 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 SERPINB13Q9UIV8 391 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 CDC23Q9UJX2 597 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 PALLDQ8WX93 1383 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 PTPN12Q05209 780 aaKnown RBP9.19□□□□□ -0.94
CTNND1-227ENST00000530748 SGO2Q562F6 1265 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 TAB3Q8N5C8 712 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-227ENST00000530748 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 KIF9Q9HAQ2 790 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 PARVGQ9HBI0 331 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 CPSF2Q9P2I0 782 aaKnown RBP9.19□□□□□ -0.94
CTNND1-227ENST00000530748 JRKLQ9Y4A0 524 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 PCDHA5Q9Y5H7 936 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 ASPHQ12797 758 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 SMYD4Q8IYR2 804 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-227ENST00000530748 STAG1Q8WVM7 1258 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 BRIP1Q9BX63 1249 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 PCDHA13Q9Y5I0 950 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 CAPN7Q9Y6W3 813 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 ANXA13P27216 316 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 RESTQ13127 1097 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 DALRD3Q5D0E6 543 aaKnown RBP9.19□□□□□ -0.94
CTNND1-227ENST00000530748 JADE1Q6IE81 842 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 GRAMD1CQ8IYS0 662 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 VCX3AQ9NNX9 186 aa9.19□□□□□ -0.94
CTNND1-227ENST00000530748 HEXIM1O94992 359 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 PLCG1P19174 1290 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 JAK3P52333 1124 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 GOLGA8FQ08AF8 430 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 GOLGA8DPQ0D2H9 430 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 MMEL1Q495T6 779 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 DNAJC24Q6P3W2 148 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 TMED8Q6PL24 325 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 RABGGTAQ92696 567 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 MASTLQ96GX5 879 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 EMILIN3Q9NT22 766 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 PYCARDQ9ULZ3 195 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 NUB1Q9Y5A7 615 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ERBB3P21860 1342 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 PGRMC1O00264 195 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 WDR46O15213 610 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 GFPT2O94808 682 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 SUSD4Q5VX71 490 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 NAA35Q5VZE5 725 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 PLEKHG2Q9H7P9 1386 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 POC1B-GALNT4F8VUJ3 575 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 INO80B-WBP1J3KQ70 363 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ATP8B1O43520 1251 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ACTN1P12814 892 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 IFNAR1P17181 557 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ARHGAP4P98171 946 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 AP3B2Q13367 1082 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 DPCR1Q3MIW9 517 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 MTERF2Q49AM1 385 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 TCP11X2Q5H9J9 407 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 DARS2Q6PI48 645 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ARHGEF18Q6ZSZ5 1173 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 INO80BQ9C086 356 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 BAIAP2L1Q9UHR4 511 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ARL4AP40617 200 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 SNX1Q13596 522 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 CUL4AQ13619 759 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 DBN1Q16643 649 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ZSCAN26Q16670 478 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 RESP18Q5W5W9 173 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ARL6IP4Q66PJ3 421 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 USP17L2Q6R6M4 530 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 C4orf50Q6ZRC1 276 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 TCP11Q8WWU5 503 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 MAGOHBQ96A72 148 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 RPF1Q9H9Y2 349 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 A2ML1A8K2U0 1454 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 RBBP5Q15291 538 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 PANX2Q96RD6 677 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ZSWIM5Q9P217 1185 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 RNF14Q9UBS8 474 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 LCMT1Q9UIC8 334 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 DIS3Q9Y2L1 958 aaKnown RBP9.18□□□□□ -0.94
CTNND1-227ENST00000530748 ANGPTL3Q9Y5C1 460 aa9.18□□□□□ -0.94
CTNND1-227ENST00000530748 TTI1O43156 1089 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 MSH2P43246 934 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 KPNA2P52292 529 aaKnown RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 PPP1R18Q6NYC8 613 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms