RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 CACNA2D4Q7Z3S7 1137 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 PPP1R12CQ9BZL4 782 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 TSKSQ9UJT2 592 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 ANAPC4Q9UJX5 808 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 TLDC2A0PJX2 215 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 PALMO75781 387 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 SLC1A4P43007 532 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 CASP7P55210 303 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 FOXO4P98177 505 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 EHHADHQ08426 723 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 PLS1Q14651 629 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 SGSM1Q2NKQ1 1148 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 CCDC38Q502W7 563 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 OR52E8Q6IFG1 317 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 NOX5Q96PH1 765 aa15.46■□□□□ 0.06
PCF11-204ENST00000530660 CNOT10Q9H9A5 744 aaKnown RBP15.46■□□□□ 0.06
PCF11-204ENST00000530660 GOLGA6L10A0A0M3HER8 536 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 H0Y3Z8 333 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 DHX9Q08211 1270 aaKnown RBP15.45■□□□□ 0.06
PCF11-204ENST00000530660 NDNQ99608 321 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 PUS3Q9BZE2 481 aaKnown RBP15.45■□□□□ 0.06
PCF11-204ENST00000530660 ADAM7Q9H2U9 754 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 THAP9Q9H5L6 903 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 BNIP1Q12981 228 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 PI16Q6UXB8 463 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 PBKQ96KB5 322 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 PHACTR1Q9C0D0 580 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 RAB17Q9H0T7 212 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 FOXP1Q9H334 677 aaPredicted RBP15.45■□□□□ 0.06
PCF11-204ENST00000530660 MAGEC2Q9UBF1 373 aaPredicted RBP15.45■□□□□ 0.06
PCF11-204ENST00000530660 PLEKHG1Q9ULL1 1385 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 TRIM75PA6NK02 468 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 DAPK3O43293 454 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 ADORA1P30542 326 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 SCARF1Q14162 830 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 ENOX2Q16206 610 aaKnown RBP15.45■□□□□ 0.06
PCF11-204ENST00000530660 GALNTL6Q49A17 601 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 TLCD1Q96CP7 247 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 INPP4AQ96PE3 977 aaPredicted RBP15.45■□□□□ 0.06
PCF11-204ENST00000530660 AP1M1Q9BXS5 423 aa15.45■□□□□ 0.06
PCF11-204ENST00000530660 FAM207AQ9NSI2 230 aaPredicted RBP15.45■□□□□ 0.06
PCF11-204ENST00000530660 GPAA1O43292 621 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 RPN1P04843 607 aaKnown RBP15.44■□□□□ 0.06
PCF11-204ENST00000530660 ZNF174Q15697 407 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 LRP10Q7Z4F1 713 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 FBF1Q8TES7 1133 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 CENPTQ96BT3 561 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 RMI1Q9H9A7 625 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 SNX3O60493 162 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 MYBP10242 640 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 EEF1GP26641 437 aaKnown RBP15.44■□□□□ 0.06
PCF11-204ENST00000530660 PEX5P50542 639 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 PABPC1LQ4VXU2 614 aaKnown RBP15.44■□□□□ 0.06
PCF11-204ENST00000530660 CCDC178Q5BJE1 867 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 ZNF496Q96IT1 587 aaPredicted RBP15.44■□□□□ 0.06
PCF11-204ENST00000530660 INTS9Q9NV88 658 aaKnown RBP15.44■□□□□ 0.06
PCF11-204ENST00000530660 PHF24Q9UPV7 400 aa15.44■□□□□ 0.06
PCF11-204ENST00000530660 F8VZ95 297 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 ITGA6P23229 1130 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 TNNC1P63316 161 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 MIGA2Q7L4E1 593 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 TMC3Q7Z5M5 1100 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 CCNJLQ8IV13 435 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 USP38Q8NB14 1042 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 UTP4Q969X6 686 aaKnown RBP15.43■□□□□ 0.06
PCF11-204ENST00000530660 IFT43Q96FT9 208 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 DDX23Q9BUQ8 820 aaKnown RBP15.43■□□□□ 0.06
PCF11-204ENST00000530660 MOV10L1Q9BXT6 1211 aaKnown RBP15.43■□□□□ 0.06
PCF11-204ENST00000530660 ZWILCHQ9H900 591 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 CWC25Q9NXE8 425 aaPredicted RBP15.43■□□□□ 0.06
PCF11-204ENST00000530660 ATP8A1Q9Y2Q0 1164 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 GM2AP17900 193 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 IL15P40933 162 aaPredicted RBP15.43■□□□□ 0.06
PCF11-204ENST00000530660 ZNF131P52739 623 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 IFI35P80217 286 aaPredicted RBP15.43■□□□□ 0.06
PCF11-204ENST00000530660 ASRGL1Q7L266 308 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 FITM2Q8N6M3 262 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 DDX47Q9H0S4 455 aaKnown RBP15.43■□□□□ 0.06
PCF11-204ENST00000530660 PLAGL2Q9UPG8 496 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 A0A0G2JS52 829 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 ABLIM1O14639 778 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 CALB2P22676 271 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 DYNC1I2Q13409 638 aaKnown RBP15.43■□□□□ 0.06
PCF11-204ENST00000530660 SDCCAG8Q86SQ7 713 aaPredicted RBP15.43■□□□□ 0.06
PCF11-204ENST00000530660 ADSSL1Q8N142 457 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 RNPEPL1Q9HAU8 725 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCF11-204ENST00000530660 RNF14Q9UBS8 474 aa15.43■□□□□ 0.06
PCF11-204ENST00000530660 ZAP70P43403 619 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 CUL1Q13616 776 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 TMEM67Q5HYA8 995 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 PDXDC2PQ6P474 469 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 IGDCC4Q8TDY8 1250 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 DYDC1Q8WWB3 177 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 FGFR1OP2Q9NVK5 253 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 GBP1P32455 592 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 CDK17Q00537 523 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 CCDC155Q8N6L0 562 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 SUPT20HQ8NEM7 779 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms