RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 TMEM31Q5JXX7 168 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 ANKRD45Q5TZF3 282 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 FAM117BQ6P1L5 589 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 CNKSR3Q6P9H4 555 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.98□□□□□ -0.817e-6■□□□□ 11
TGFBR3-208ENST00000529608 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 CAGE1Q8TC20 777 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 C17orf80Q9BSJ5 609 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 HELLSQ9NRZ9 838 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 GTF2IRD1Q9UHL9 959 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 DDX41Q9UJV9 622 aaKnown RBP9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 NOD1Q9Y239 953 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 RAD50Q92878 1312 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 BHMG1C9JSJ3 638 aaPredicted RBP9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 PI4K2BG5E9Z4 385 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 HAS3O00219 553 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 OPLAHO14841 1288 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 SORBS3O60504 671 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 GPR37L1O60883 481 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 RGS20O76081 388 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 GH1P01241 217 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 ZNF286BP0CG31 522 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 IL9P15248 144 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 KCNJ6P48051 423 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 PDE1AP54750 535 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 ERVK-21P61565 698 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 CDC37Q16543 378 aaPredicted RBP9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 BRDTQ58F21 947 aaPredicted RBP9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 ZNF618Q5T7W0 954 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 RGS22Q8NE09 1264 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 EVI5LQ96CN4 794 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 TTC14Q96N46 770 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 ALG1Q9BT22 464 aa9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 UBE2ZQ9H832 354 aaPredicted RBP9.97□□□□□ -0.81
TGFBR3-208ENST00000529608 BRWD1Q9NSI6 2320 aa9.96□□□□□ -0.81
TGFBR3-208ENST00000529608 QRICH1Q2TAL8 776 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 MCMDC2Q4G0Z9 681 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 BMP2KLQ5H9B9 411 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 FAM178BQ8IXR5 827 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 ADGRF4Q8IZF3 695 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 RAD9AQ99638 391 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 CDHR5Q9HBB8 845 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 LMCD1Q9NZU5 365 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 ZMYM6O95789 1325 aa9.96□□□□□ -0.82
TGFBR3-208ENST00000529608 ABHD14A-ACY1A0A1B0GW23 586 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 PPP1R11O60927 126 aaPredicted RBP9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 F2P00734 622 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 EIF2AK2P19525 551 aaKnown RBP9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 CASTP20810 708 aaKnown RBP9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 KCNA5P22460 613 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 SP2Q02086 613 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 BECN1Q14457 450 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 STXBP2Q15833 593 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 KIAA0753Q2KHM9 967 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 HSDL1Q3SXM5 330 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 MFSD6Q6ZSS7 791 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 CCDC155Q8N6L0 562 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 C7orf31Q8N865 590 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 PNMA1Q8ND90 353 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 DBF4BQ8NFT6 615 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 NSUN6Q8TEA1 469 aaKnown RBP9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 GPKOWQ92917 476 aaPredicted RBP eCLIP9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 TGS1Q96RS0 853 aaKnown RBP9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 RMDN3Q96TC7 470 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 MPHOSPH6Q99547 160 aaKnown RBP9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 LNPKQ9C0E8 428 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 JMJD4Q9H9V9 463 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 HCN4Q9Y3Q4 1203 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 TELO2Q9Y4R8 837 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 ABCB11O95342 1321 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 CCDC171Q6TFL3 1326 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 RALGAPA2Q2PPJ7 1873 aa9.95□□□□□ -0.82
TGFBR3-208ENST00000529608 KDM4AO75164 1064 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 LGR5O75473 907 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 NR3C2P08235 984 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 HOXD8P13378 290 aaPredicted RBP9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 HTRA4P83105 476 aaPredicted RBP9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 PTK7Q13308 1070 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 DGKDQ16760 1214 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 SLC35G1Q2M3R5 365 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 LEXMQ3ZCV2 418 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 GPATCH4Q5T3I0 446 aaKnown RBP9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 MYSM1Q5VVJ2 828 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 STAG2Q8N3U4 1231 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 IL31RAQ8NI17 732 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 ANKS1AQ92625 1134 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 TBC1D32Q96NH3 1257 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 VAT1LQ9HCJ6 419 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 PXMP2Q9NR77 195 aa9.94□□□□□ -0.82
TGFBR3-208ENST00000529608 COL4A6Q14031 1691 aa9.93□□□□□ -0.82
TGFBR3-208ENST00000529608 B4E1Z4 1266 aa9.93□□□□□ -0.82
TGFBR3-208ENST00000529608 H3BQ06 376 aaPredicted RBP9.93□□□□□ -0.82
TGFBR3-208ENST00000529608 CFBP00751 764 aa9.93□□□□□ -0.82
TGFBR3-208ENST00000529608 HSD17B4P51659 736 aa9.93□□□□□ -0.82
TGFBR3-208ENST00000529608 IKBKEQ14164 716 aa9.93□□□□□ -0.82
TGFBR3-208ENST00000529608 ARHGEF16Q5VV41 709 aa9.93□□□□□ -0.82
TGFBR3-208ENST00000529608 DGKHQ86XP1 1220 aa9.93□□□□□ -0.82
TGFBR3-208ENST00000529608 GJD3Q8N144 294 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms