RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 GJB4Q9NTQ9 266 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 TBX21Q9UL17 535 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 MROH7Q68CQ1 1323 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 IGLV3-22A0A075B6J6 115 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 JAK2O60674 1132 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 ARP10275 920 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 GALNT17Q6IS24 598 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 CHRDL2Q6WN34 429 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 NIPA1Q7RTP0 329 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 BLIDQ8IZY5 108 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 GPR20Q99678 358 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 C16orf70Q9BSU1 422 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 TRPV6Q9H1D0 765 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 KCNJ14Q9UNX9 436 aa18.4■□□□□ 0.54
TSPAN4-218ENST00000529566 HAS3O00219 553 aa18.39■□□□□ 0.53
TSPAN4-218ENST00000529566 F2P00734 622 aa18.39■□□□□ 0.53
TSPAN4-218ENST00000529566 ZNF286BP0CG31 522 aa18.39■□□□□ 0.53
TSPAN4-218ENST00000529566 NFRKBQ6P4R8 1299 aa18.39■□□□□ 0.53
TSPAN4-218ENST00000529566 GIMAP8Q8ND71 665 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-218ENST00000529566 PPP1R13LQ8WUF5 828 aa18.39■□□□□ 0.53
TSPAN4-218ENST00000529566 ZSCAN31Q96LW9 406 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-218ENST00000529566 PRDM5Q9NQX1 630 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-218ENST00000529566 TMEM39AQ9NV64 488 aa18.39■□□□□ 0.53
TSPAN4-218ENST00000529566 B4GALT4O60513 344 aa18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 CD2BP2O95400 341 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 CIITAP33076 1130 aa18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 BMP8BP34820 402 aa18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 ITGB3BPQ13352 177 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 ALG1Q9BT22 464 aa18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 AGO4Q9HCK5 861 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 PRKAG2Q9UGJ0 569 aa18.38■□□□□ 0.53
TSPAN4-218ENST00000529566 DOCK5Q9H7D0 1870 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 PSEN2P49810 448 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 USP11P51784 963 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 MDM2Q00987 491 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 PTPN11Q06124 597 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 SESTD1Q86VW0 696 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 CCDC83Q8IWF9 413 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 OXER1Q8TDS5 423 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 WASF1Q92558 559 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 LENG9Q96B70 501 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 CTAGE1Q96RT6 745 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 LLPHQ9BRT6 129 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 TRMT13Q9NUP7 481 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 PKD2L1Q9P0L9 805 aa18.37■□□□□ 0.53
TSPAN4-218ENST00000529566 GSTTP1A0A1W2PQM5 241 aa18.36■□□□□ 0.53
TSPAN4-218ENST00000529566 DHX15O43143 795 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-218ENST00000529566 NFASCO94856 1347 aa18.36■□□□□ 0.53
TSPAN4-218ENST00000529566 LGALS2P05162 132 aa18.36■□□□□ 0.53
TSPAN4-218ENST00000529566 ZNF76P36508 570 aa18.36■□□□□ 0.53
TSPAN4-218ENST00000529566 MFSD10Q14728 455 aa18.36■□□□□ 0.53
TSPAN4-218ENST00000529566 LTBP2Q14767 1821 aa18.36■□□□□ 0.53
TSPAN4-218ENST00000529566 TBCKQ8TEA7 893 aa18.36■□□□□ 0.53
TSPAN4-218ENST00000529566 BADQ92934 168 aa18.36■□□□□ 0.53
TSPAN4-218ENST00000529566 NOP56O00567 594 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-218ENST00000529566 TLR3O15455 904 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-218ENST00000529566 TIMP1P01033 207 aa18.35■□□□□ 0.53
TSPAN4-218ENST00000529566 XBP1P17861 261 aa18.35■□□□□ 0.53
TSPAN4-218ENST00000529566 KIAA0753Q2KHM9 967 aa18.35■□□□□ 0.53
TSPAN4-218ENST00000529566 PLA2G4DQ86XP0 818 aa18.35■□□□□ 0.53
TSPAN4-218ENST00000529566 TRIOBPQ9H2D6 2365 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 CYP3A7-CYP3A51PA0A087WV96 503 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 ST18O60284 1047 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 RAG1P15918 1043 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 CYP3A7P24462 503 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 SP4Q02446 784 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 HIC1Q14526 733 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 FAM47CQ5HY64 1035 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 HABP4Q5JVS0 413 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 GDF6Q6KF10 455 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 SEPT1Q8WYJ6 367 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 TNFRSF25Q93038 417 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 LBHD1Q9BQE6 289 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 NOC4LQ9BVI4 516 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 KATNAL1Q9BW62 490 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 JPH1Q9HDC5 661 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 HDAC6Q9UBN7 1215 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 SLC9A2Q9UBY0 812 aa18.34■□□□□ 0.53
TSPAN4-218ENST00000529566 H3BRB1 525 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 IPO5O00410 1097 aaKnown RBP18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 CCNE2O96020 404 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 SUPT20HL2P0C7V6 817 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 HOXC8P31273 242 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 TCF7P36402 384 aaPredicted RBP18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 CHMP4BP1P59074 171 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 PRR16Q569H4 304 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 EARS2Q5JPH6 523 aaKnown RBP18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 KRT25Q7Z3Z0 450 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 TRIM50Q86XT4 487 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 MBOAT7Q96N66 472 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 PCYT2Q99447 389 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 SDF4Q9BRK5 362 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 TUT1Q9H6E5 874 aaKnown RBP18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 GTF2IRD1Q9UHL9 959 aa18.33■□□□□ 0.52
TSPAN4-218ENST00000529566 UMODL1Q5DID0 1318 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 LGR5O75473 907 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 ATG7O95352 703 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 MMP1P03956 469 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms