RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PLAGL2Q9UPG8 496 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 MRVI1Q9Y6F6 885 aa13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
AMBRA1-207ENST00000529553 MICAL3Q7RTP6 2002 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 PRR23AA6NEV1 266 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 SNHG28P0DPA3 235 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 GNAT1P11488 350 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 CAMK1Q14012 370 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 FAM26DQ5JW98 314 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 CELF3Q5SZQ8 465 aaKnown RBP13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 ZNF689Q96CS4 500 aaPredicted RBP13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 RIPOR3Q96MK2 946 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 C16orf70Q9BSU1 422 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 CHMP4BQ9H444 224 aaKnown RBP13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 RC3H2Q9HBD1 1191 aaKnown RBP13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 INCENPQ9NQS7 918 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 ABCB11O95342 1321 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 ADGRA3Q8IWK6 1321 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 MYO15AQ9UKN7 3530 aa13.63□□□□□ -0.23
AMBRA1-207ENST00000529553 NR3C2P08235 984 aa13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 TGFB3P10600 412 aa13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 CTDSPL2Q05D32 466 aa13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 PTPN21Q16825 1174 aa13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 ARHGEF16Q5VV41 709 aa13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 TBC1D5Q92609 795 aa13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 SPATA33Q96N06 139 aa13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 RNPEPQ9H4A4 650 aa13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 DDX19BQ9UMR2 479 aa13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 USP15Q9Y4E8 981 aaPredicted RBP13.62□□□□□ -0.23
AMBRA1-207ENST00000529553 MYH7P12883 1935 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 FSD2A1L4K1 749 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 H3BRB1 525 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 TREHO43280 583 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 BTG3Q14201 252 aaPredicted RBP13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 USH1GQ495M9 461 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 SPPL3Q8TCT6 385 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 RPGRIP1Q96KN7 1286 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 SEC62Q99442 399 aaKnown RBP13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 TUT1Q9H6E5 874 aaKnown RBP13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 COL20A1Q9P218 1284 aa13.61□□□□□ -0.23
AMBRA1-207ENST00000529553 MYO7AQ13402 2215 aa13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 ENPP3O14638 875 aa13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 DGKIO75912 1065 aa13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 SMIM10L2AP0DMW4 78 aa13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 SMIM10L2BP0DMW5 78 aa13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 HSPD1P10809 573 aaKnown RBP13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 SUSD6Q92537 303 aa13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 OSBPL7Q9BZF2 842 aa13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 PXMP2Q9NR77 195 aa13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 MAP3K20Q9NYL2 800 aaKnown RBP13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 MRPL11Q9Y3B7 192 aaKnown RBP13.6□□□□□ -0.23
AMBRA1-207ENST00000529553 SMARCA5O60264 1052 aaPredicted RBP13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 CTSHP09668 335 aa13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 EIF2AK2P19525 551 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 DNAJB1P25685 340 aa13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 NRIP1P48552 1158 aa13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 ALX1Q15699 326 aa13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 MCTP2Q6DN12 878 aa13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 NKD2Q969F2 451 aaPredicted RBP13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 USP26Q9BXU7 913 aa13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 EHMT1Q9H9B1 1298 aa13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 RIF1Q5UIP0 2472 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 RALGAPA2Q2PPJ7 1873 aa13.59□□□□□ -0.23
AMBRA1-207ENST00000529553 DMDP11532 3685 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 FOXP2O15409 715 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 KDM4AO75164 1064 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 RGS20O76081 388 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 GGPS1O95749 300 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 GLP2RO95838 553 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 ITGB1P05556 798 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 ADAM17P78536 824 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 VSIG10LQ86VR7 867 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 UBALD2Q8IYN6 164 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 CMTR2Q8IYT2 770 aaKnown RBP13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 CDCA3Q99618 268 aaPredicted RBP13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 MLXIPQ9HAP2 919 aa13.58□□□□□ -0.24
AMBRA1-207ENST00000529553 KMT2EQ8IZD2 1858 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 RBAK-RBAKDNI3L0D1 243 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 CCER2I3L3R5 266 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 SP2Q02086 613 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 GHRHRQ02643 423 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 TMEM184AQ6ZMB5 413 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 STOX1Q6ZVD7 989 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 ADGRD2Q7Z7M1 963 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 ADSSL1Q8N142 457 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 POF1BQ8WVV4 589 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 TLE6Q9H808 572 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 SETD4Q9NVD3 440 aa13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 BARX2Q9UMQ3 279 aaPredicted RBP13.57□□□□□ -0.24
AMBRA1-207ENST00000529553 CHRNA1P02708 482 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 LGALS2P05162 132 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 PCP11498 1178 aaKnown RBP13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 HSD17B4P51659 736 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 UBE3AQ05086 875 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms