RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 PPFIA4O75335 1185 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 F2P00734 622 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 FGAP02671 866 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 ZNF286BP0CG31 522 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 GOLGA8HP0CJ92 632 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 SNHG28P0DPA3 235 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 PCP11498 1178 aaKnown RBP10.5□□□□□ -0.73
VPS11-203ENST00000529545 HTRA4P83105 476 aaPredicted RBP10.5□□□□□ -0.73
VPS11-203ENST00000529545 NHLH1Q02575 133 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 CDC37Q16543 378 aaPredicted RBP10.5□□□□□ -0.73
VPS11-203ENST00000529545 TCTN1Q2MV58 587 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 C20orf194Q5TEA3 1177 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 KCNV1Q6PIU1 500 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 PPTC7Q8NI37 304 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 SEPT8Q92599 483 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 EVI5LQ96CN4 794 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 MFSD14AQ96MC6 490 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 UBA5Q9GZZ9 404 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 RNF41Q9H4P4 317 aaPredicted RBP10.5□□□□□ -0.73
VPS11-203ENST00000529545 NSUN3Q9H649 340 aaKnown RBP10.5□□□□□ -0.73
VPS11-203ENST00000529545 MYH7BA7E2Y1 1941 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 HAS3O00219 553 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 UPP2O95045 317 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 NR3C2P08235 984 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 HSPD1P10809 573 aaKnown RBP10.49□□□□□ -0.73
VPS11-203ENST00000529545 EIF2AK2P19525 551 aaKnown RBP10.49□□□□□ -0.73
VPS11-203ENST00000529545 ZNF200P98182 395 aaPredicted RBP10.49□□□□□ -0.73
VPS11-203ENST00000529545 MBTPS1Q14703 1052 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 TRIM71Q2Q1W2 868 aaKnown RBP10.49□□□□□ -0.73
VPS11-203ENST00000529545 MCMDC2Q4G0Z9 681 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 CCDC178Q5BJE1 867 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 FBXO11Q86XK2 927 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 ADHFE1Q8IWW8 467 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 TMEM192Q8IY95 271 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 TBC1D5Q92609 795 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 ESR2Q92731 530 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 ATP6V0A1Q93050 837 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 DDX27Q96GQ7 796 aaKnown RBP10.49□□□□□ -0.73
VPS11-203ENST00000529545 FBXL18Q96ME1 805 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 SPATA33Q96N06 139 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 POP1Q99575 1024 aaKnown RBP10.49□□□□□ -0.73
VPS11-203ENST00000529545 CLDND1Q9NY35 253 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 COL20A1Q9P218 1284 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 MICAL3Q7RTP6 2002 aa10.49□□□□□ -0.73
VPS11-203ENST00000529545 C17orf102A2RUQ5 167 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 CFBP00751 764 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 HAND2P61296 217 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 ZP2Q05996 745 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 PLEKHG4Q58EX7 1191 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 TCEAL5Q5H9L2 206 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 TRAF7Q6Q0C0 670 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 SERINC5Q86VE9 423 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 IQCA1Q86XH1 822 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 DGKHQ86XP1 1220 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 OTUD7AQ8TE49 926 aaPredicted RBP10.48□□□□□ -0.73
VPS11-203ENST00000529545 WNT8BQ93098 351 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 TOP1MTQ969P6 601 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 CPVLQ9H3G5 476 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 KAT14Q9H8E8 782 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 PXMP2Q9NR77 195 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 LHX6Q9UPM6 363 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 ZMYM6O95789 1325 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 MYH6P13533 1939 aa10.48□□□□□ -0.73
VPS11-203ENST00000529545 NLRC5Q86WI3 1866 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 CAND2O75155 1236 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 GNAT1P11488 350 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 MYCLP12524 364 aaPredicted RBP10.47□□□□□ -0.73
VPS11-203ENST00000529545 HOXD8P13378 290 aaPredicted RBP10.47□□□□□ -0.73
VPS11-203ENST00000529545 NT5C2P49902 561 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 ASPRV1Q53RT3 343 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 CELF3Q5SZQ8 465 aaKnown RBP10.47□□□□□ -0.73
VPS11-203ENST00000529545 MYSM1Q5VVJ2 828 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 TICAM2Q86XR7 235 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 ADGRF4Q8IZF3 695 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 FIBCD1Q8N539 461 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 PNMA1Q8ND90 353 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 APBB2Q92870 758 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 ZKSCAN3Q9BRR0 538 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 IFIH1Q9BYX4 1025 aaKnown RBP10.47□□□□□ -0.73
VPS11-203ENST00000529545 LMAN2LQ9H0V9 348 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 MLXIPQ9HAP2 919 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 VAT1LQ9HCJ6 419 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 RWDD3Q9Y3V2 267 aa10.47□□□□□ -0.73
VPS11-203ENST00000529545 H3BRB1 525 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 SORBS3O60504 671 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 GGPS1O95749 300 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 RB1P06400 928 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 PARP1P09874 1014 aaKnown RBP10.46□□□□□ -0.73
VPS11-203ENST00000529545 TGFB3P10600 412 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 CTNNB1P35222 781 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 MFAP1P55081 439 aaKnown RBP10.46□□□□□ -0.73
VPS11-203ENST00000529545 QRICH1Q2TAL8 776 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 HFE2Q6ZVN8 426 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 RPAINQ86UA6 219 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 IL17RAQ96F46 866 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 FAM227BQ96M60 508 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 LARP6Q9BRS8 491 aaKnown RBP10.46□□□□□ -0.73
VPS11-203ENST00000529545 C11orf84Q9BUA3 381 aaPredicted RBP10.46□□□□□ -0.73
VPS11-203ENST00000529545 AMNQ9BXJ7 453 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms