RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ADCY6O43306 1168 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 ORC4O43929 436 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 B4GALT4O60513 344 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 FLOT1O75955 427 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 BAIAP3O94812 1187 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 OATP04181 439 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 ADRB1P08588 477 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 C6orf222P0C671 652 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-212ENST00000528930 TSPY3P0CV98 308 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 TSPY8P0CW00 308 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 GJA9P57773 515 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 KLRC3Q07444 240 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 TCEAL5Q5H9L2 206 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 RPAINQ86UA6 219 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 CYP4X1Q8N118 509 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 RDH13Q8NBN7 331 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 BANK1Q8NDB2 785 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 VTI1AQ96AJ9 217 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 ATG4CQ96DT6 458 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 RIPOR3Q96MK2 946 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 SPATC1LQ9H0A9 340 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 IL25Q9H293 177 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 MROH8Q9H579 483 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
SSBP3-212ENST00000528930 IL17RBQ9NRM6 502 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 FBXO28Q9NVF7 368 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 CLDND1Q9NY35 253 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 CTNNA3Q9UI47 895 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 DIS3Q9Y2L1 958 aaKnown RBP9.98□□□□□ -0.81
SSBP3-212ENST00000528930 MYO10Q9HD67 2058 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 AXIN1O15169 862 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 TTLL1O95922 423 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 NDUFB10O96000 172 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 RFC2P35250 354 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 NOVP48745 357 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 MFAP1P55081 439 aaKnown RBP9.97□□□□□ -0.81
SSBP3-212ENST00000528930 RSPO4Q2I0M5 234 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-212ENST00000528930 FAM83BQ5T0W9 1011 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 KIAA0319Q5VV43 1072 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 DEFB128Q7Z7B8 93 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
SSBP3-212ENST00000528930 FAM160A2Q8N612 972 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-212ENST00000528930 NUP88Q99567 741 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-212ENST00000528930 SEZ6LQ9BYH1 1024 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 TRPV6Q9H1D0 765 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 PRDM9Q9NQV7 894 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 DIAPH3Q9NSV4 1193 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 FAM184BQ9ULE4 1060 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 SYNPO2Q9UMS6 1093 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 GRIN2DO15399 1336 aa9.97□□□□□ -0.81
SSBP3-212ENST00000528930 SCN10AQ9Y5Y9 1956 aa9.96□□□□□ -0.81
SSBP3-212ENST00000528930 TSPY2A6NKD2 308 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 NMT2O60551 498 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 CD2BP2O95400 341 aaKnown RBP9.96□□□□□ -0.82
SSBP3-212ENST00000528930 FECHP22830 423 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 RPIAP49247 311 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 HAND2P61296 217 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 DLX2Q07687 328 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-212ENST00000528930 FUT2Q10981 343 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 TMEM132BQ14DG7 1078 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 PTPROQ16827 1216 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 ZNF792Q3KQV3 632 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 MB21D1Q8N884 522 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 GMCL1P1Q8NEA9 526 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 REPS2Q8NFH8 660 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 THAP11Q96EK4 314 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 DSCC1Q9BVC3 393 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 SEMA4AQ9H3S1 761 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 NSUN3Q9H649 340 aaKnown RBP9.96□□□□□ -0.82
SSBP3-212ENST00000528930 PPP1R9AQ9ULJ8 1098 aa9.96□□□□□ -0.82
SSBP3-212ENST00000528930 VWA5AO00534 786 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 NCK2O43639 380 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 RAD21O60216 631 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 RANBP6O60518 1105 aaKnown RBP9.95□□□□□ -0.82
SSBP3-212ENST00000528930 TBX10O75333 385 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 WFS1O76024 890 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 LMNAP02545 664 aaKnown RBP9.95□□□□□ -0.82
SSBP3-212ENST00000528930 CHMLP26374 656 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 ICAM3P32942 547 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 WDR5P61964 334 aaKnown RBP9.95□□□□□ -0.82
SSBP3-212ENST00000528930 EP400NLQ6ZTU2 488 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 TBC1D10CQ8IV04 446 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 LRRC47Q8N1G4 583 aaKnown RBP9.95□□□□□ -0.82
SSBP3-212ENST00000528930 CRIPAKQ8N1N5 446 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 MSL3Q8N5Y2 521 aaKnown RBP9.95□□□□□ -0.82
SSBP3-212ENST00000528930 STAG1Q8WVM7 1258 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 CHAMP1Q96JM3 812 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 TCP11L1Q9NUJ3 509 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 ZNF214Q9UL59 606 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-212ENST00000528930 CNPY2Q9Y2B0 182 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 PCDHGC5Q9Y5F6 944 aa9.95□□□□□ -0.82
SSBP3-212ENST00000528930 LAMA4Q16363 1823 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 DDX11L8A8MPP1 907 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 ZNF213O14771 459 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 GJB5O95377 273 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 AVPP01185 164 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 PCP11498 1178 aaKnown RBP9.94□□□□□ -0.82
SSBP3-212ENST00000528930 FCER1AP12319 257 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 ITGA7Q13683 1181 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms