RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	CIITA	P33076	1130 aa		8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	ARHGAP4	P98171	946 aa		8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	ST3GAL1	Q11201	340 aa		8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	FSCN1	Q16658	493 aa	Known RBP	8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	CEP55	Q53EZ4	464 aa		8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	CELF3	Q5SZQ8	465 aa	Known RBP	8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	MYSM1	Q5VVJ2	828 aa		8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	COPS5	Q92905	334 aa		8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	TMX3	Q96JJ7	454 aa		8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	AIFM3	Q96NN9	605 aa		8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	MLXIP	Q9HAP2	919 aa		8.84	□□□□□ -0.99
MS4A6A-208	ENST00000528851	PLXNA1	Q9UIW2	1896 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	ZNF76	P36508	570 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	BEX3	Q00994	111 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	SP2	Q02086	613 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	ARHGAP1	Q07960	439 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	TRIM29	Q14134	588 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	KRT25	Q7Z3Z0	450 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	FAM184A	Q8NB25	1140 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	DPF3	Q92784	378 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	LENG1	Q96BZ8	264 aa	Predicted RBP	8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	ZFP91	Q96JP5	570 aa	Predicted RBP	8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	BRMS1	Q9HCU9	246 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	STARD7	Q9NQZ5	370 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	KIF3A	Q9Y496	699 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	NR2E3	Q9Y5X4	410 aa		8.83	□□□□□ -1
MS4A6A-208	ENST00000528851	MYADML2	A6NDP7	307 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	ADAMTS3	O15072	1205 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	JAK2	O60674	1132 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	GGPS1	O95749	300 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	SEMA3F	Q13275	785 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	MTMR1	Q13613	665 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	NPY5R	Q15761	445 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	MOXD1	Q6UVY6	613 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	PPTC7	Q8NI37	304 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	VTI1A	Q96AJ9	217 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	TOX2	Q96NM4	488 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	NAP1L4	Q99733	375 aa	Known RBP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	MTG1	Q9BT17	334 aa	Predicted RBP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	KCNJ14	Q9UNX9	436 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	RBBP6	Q7Z6E9	1792 aa	Known RBP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851		A0A0U1RQG5	324 aa	Predicted RBP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851		A0A1W2PQ45	241 aa	Predicted RBP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851		A0A1W2PQY0	241 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	ARVCF	O00192	962 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	EVI5	O60447	810 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	CD2BP2	O95400	341 aa	Known RBP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	UBA1	P22314	1058 aa	Known RBP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	KRT2	P35908	639 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	CDK7	P50613	346 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	SNX17	Q15036	470 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	NONO	Q15233	471 aa	Known RBP eCLIP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	SAFB	Q15424	915 aa	Known RBP eCLIP	8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	DGKD	Q16760	1214 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	KRT40	Q6A162	431 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	METTL7B	Q6UX53	244 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	PLA2G4D	Q86XP0	818 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	SLC43A3	Q8NBI5	491 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	RASGRP4	Q8TDF6	673 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	TBCK	Q8TEA7	893 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	AFG1L	Q8WV93	481 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	SNX21	Q969T3	373 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	FERMT2	Q96AC1	680 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	PGBD1	Q96JS3	809 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	SPATA33	Q96N06	139 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	KCNH7	Q9NS40	1196 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	TBC1D22B	Q9NU19	505 aa		8.82	□□□□□ -1
MS4A6A-208	ENST00000528851	NFASC	O94856	1347 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	CYP3A7-CYP3A51P	A0A087WV96	503 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	CCDC194	A0A1B0GVG4	234 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	ATP9A	O75110	1047 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	MMP1	P03956	469 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	MMP3	P08254	477 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	MYL3	P08590	195 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	AR	P10275	920 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	HOXD8	P13378	290 aa	Predicted RBP	8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	KCNA2	P16389	499 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	CYP3A7	P24462	503 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	PURA	Q00577	322 aa	Known RBP	8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	SET	Q01105	290 aa	Predicted RBP	8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	PTPN11	Q06124	597 aa	Predicted RBP	8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	CUL4A	Q13619	759 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	ITGA7	Q13683	1181 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	LRRC26	Q2I0M4	334 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851		Q4G0T1	1027 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	CXCL17	Q6UXB2	119 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	CYFIP1	Q7L576	1253 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	FBXO18	Q8NFZ0	1043 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	C8orf76	Q96K31	380 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	MROH7	Q68CQ1	1323 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	MYH6	P13533	1939 aa		8.81	□□□□□ -1
MS4A6A-208	ENST00000528851	KIAA0100	Q14667	2235 aa	Known RBP	8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	IGLV3-22	A0A075B6J6	115 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	FAM86B1	E9PN63	330 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	EDIL3	O43854	480 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	FAM86B2	P0C5J1	330 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	GCFC2	P16383	781 aa	Known RBP	8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	HSDL1	Q3SXM5	330 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	PPP4R3A	Q6IN85	833 aa		8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms