RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 UBE2SQ16763 222 aa21.37■■□□□ 1.01
YIF1A-212ENST00000528575 LY6KQ17RY6 165 aa21.37■■□□□ 1.01
YIF1A-212ENST00000528575 DHX37Q8IY37 1157 aaKnown RBP21.37■■□□□ 1.01
YIF1A-212ENST00000528575 REXO1Q8N1G1 1221 aaKnown RBP21.37■■□□□ 1.01
YIF1A-212ENST00000528575 WASF1Q92558 559 aa21.37■■□□□ 1.01
YIF1A-212ENST00000528575 COPS5Q92905 334 aa21.37■■□□□ 1.01
YIF1A-212ENST00000528575 SREBF1P36956 1147 aa21.36■■□□□ 1.01
YIF1A-212ENST00000528575 PURAQ00577 322 aaKnown RBP21.36■■□□□ 1.01
YIF1A-212ENST00000528575 STK3Q13188 491 aa21.36■■□□□ 1.01
YIF1A-212ENST00000528575 GRIN2CQ14957 1233 aa21.36■■□□□ 1.01
YIF1A-212ENST00000528575 DGKDQ16760 1214 aa21.36■■□□□ 1.01
YIF1A-212ENST00000528575 CELF3Q5SZQ8 465 aaKnown RBP21.36■■□□□ 1.01
YIF1A-212ENST00000528575 ZNF365Q70YC5 407 aa21.36■■□□□ 1.01
YIF1A-212ENST00000528575 VTI1AQ96AJ9 217 aa21.36■■□□□ 1.01
YIF1A-212ENST00000528575 MTG1Q9BT17 334 aaPredicted RBP21.36■■□□□ 1.01
YIF1A-212ENST00000528575 NOC4LQ9BVI4 516 aaKnown RBP21.36■■□□□ 1.01
YIF1A-212ENST00000528575 GBF1Q92538 1859 aa21.36■■□□□ 1.01
YIF1A-212ENST00000528575 HOXD8P13378 290 aaPredicted RBP21.35■■□□□ 1.01
YIF1A-212ENST00000528575 RABEP1Q15276 862 aa21.35■■□□□ 1.01
YIF1A-212ENST00000528575 MYSM1Q5VVJ2 828 aa21.35■■□□□ 1.01
YIF1A-212ENST00000528575 GTF3C6Q969F1 213 aa21.35■■□□□ 1.01
YIF1A-212ENST00000528575 ANO3Q9BYT9 981 aa21.35■■□□□ 1.01
YIF1A-212ENST00000528575 LIMCH1Q9UPQ0 1083 aa21.35■■□□□ 1.01
YIF1A-212ENST00000528575 UBIAD1Q9Y5Z9 338 aa21.35■■□□□ 1.01
YIF1A-212ENST00000528575 TLR3O15455 904 aaKnown RBP21.34■■□□□ 1.01
YIF1A-212ENST00000528575 PPFIA4O75335 1185 aa21.34■■□□□ 1.01
YIF1A-212ENST00000528575 MMP3P08254 477 aa21.34■■□□□ 1.01
YIF1A-212ENST00000528575 UBA1P22314 1058 aaKnown RBP21.34■■□□□ 1.01
YIF1A-212ENST00000528575 DNAJB2P25686 324 aa21.34■■□□□ 1.01
YIF1A-212ENST00000528575 PTPN11Q06124 597 aaPredicted RBP21.34■■□□□ 1.01
YIF1A-212ENST00000528575 METTL7BQ6UX53 244 aa21.34■■□□□ 1.01
YIF1A-212ENST00000528575 NIPA1Q7RTP0 329 aa21.34■■□□□ 1.01
YIF1A-212ENST00000528575 ZSCAN31Q96LW9 406 aaPredicted RBP21.34■■□□□ 1.01
YIF1A-212ENST00000528575 KATNAL1Q9BW62 490 aa21.34■■□□□ 1.01
YIF1A-212ENST00000528575 PBX4Q9BYU1 374 aa21.34■■□□□ 1.01
YIF1A-212ENST00000528575 TRMT13Q9NUP7 481 aaKnown RBP21.34■■□□□ 1.01
YIF1A-212ENST00000528575 SCN5AQ14524 2016 aa21.34■■□□□ 1.01
YIF1A-212ENST00000528575 GGPS1O95749 300 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 CYP3A4P08684 503 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 MTMR1Q13613 665 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 ME3Q16798 604 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 NFRKBQ6P4R8 1299 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.33■■□□□ 1.01
YIF1A-212ENST00000528575 USP38Q8NB14 1042 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 DAGLBQ8NCG7 672 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 AFG1LQ8WV93 481 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 KIF2CQ99661 725 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 LARP6Q9BRS8 491 aaKnown RBP21.33■■□□□ 1.01
YIF1A-212ENST00000528575 COL25A1Q9BXS0 654 aaPredicted RBP21.33■■□□□ 1.01
YIF1A-212ENST00000528575 MLXIPQ9HAP2 919 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 JADE2Q9NQC1 790 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 SH2B1Q9NRF2 756 aaPredicted RBP21.33■■□□□ 1.01
YIF1A-212ENST00000528575 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1.01
YIF1A-212ENST00000528575 TRANK1O15050 2925 aa21.33■■□□□ 1
YIF1A-212ENST00000528575 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.32■■□□□ 1
YIF1A-212ENST00000528575 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.32■■□□□ 1
YIF1A-212ENST00000528575 NLRP5P59047 1200 aa21.32■■□□□ 1
YIF1A-212ENST00000528575 PPIGQ13427 754 aaKnown RBP eCLIP21.32■■□□□ 1
YIF1A-212ENST00000528575 CTAGE1Q96RT6 745 aa21.32■■□□□ 1
YIF1A-212ENST00000528575 IL23AQ9NPF7 189 aa21.32■■□□□ 1
YIF1A-212ENST00000528575 RTEL1Q9NZ71 1219 aa21.32■■□□□ 1
YIF1A-212ENST00000528575 VPS54Q9P1Q0 977 aa21.32■■□□□ 1
YIF1A-212ENST00000528575 ST18O60284 1047 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 MYL3P08590 195 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 SUPT20HL2P0C7V6 817 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 ITGB5P18084 799 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 CCL23P55773 120 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 ARHGAP4P98171 946 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 CEP55Q53EZ4 464 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 MAFAQ8NHW3 353 aaPredicted RBP21.31■■□□□ 1
YIF1A-212ENST00000528575 CRYGNQ8WXF5 182 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 HERVK_113Q902F9 699 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 SPATA33Q96N06 139 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 MXRA8Q9BRK3 442 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 LLPHQ9BRT6 129 aaKnown RBP21.31■■□□□ 1
YIF1A-212ENST00000528575 HIPK3Q9H422 1215 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 PCDHA4Q9UN74 947 aa21.31■■□□□ 1
YIF1A-212ENST00000528575 TMEM265A0A087WTH1 108 aa21.3■■□□□ 1
YIF1A-212ENST00000528575 CYP2C9P11712 490 aa21.3■■□□□ 1
YIF1A-212ENST00000528575 SETQ01105 290 aaPredicted RBP21.3■■□□□ 1
YIF1A-212ENST00000528575 SP2Q02086 613 aa21.3■■□□□ 1
YIF1A-212ENST00000528575 SEMA3FQ13275 785 aa21.3■■□□□ 1
YIF1A-212ENST00000528575 SESTD1Q86VW0 696 aa21.3■■□□□ 1
YIF1A-212ENST00000528575 TMEM199Q8N511 208 aa21.3■■□□□ 1
YIF1A-212ENST00000528575 SCLYQ96I15 445 aa21.3■■□□□ 1
YIF1A-212ENST00000528575 MEIS1O00470 390 aa21.29■■□□□ 1
YIF1A-212ENST00000528575 NOP56O00567 594 aaKnown RBP21.29■■□□□ 1
YIF1A-212ENST00000528575 F2P00734 622 aa21.29■■□□□ 1
YIF1A-212ENST00000528575 MCM2P49736 904 aa21.29■■□□□ 1
YIF1A-212ENST00000528575 USP11P51784 963 aa21.29■■□□□ 1
YIF1A-212ENST00000528575 TIFAQ96CG3 184 aa21.29■■□□□ 1
YIF1A-212ENST00000528575 TBC1D32Q96NH3 1257 aa21.29■■□□□ 1
YIF1A-212ENST00000528575 ORC3Q9UBD5 711 aaPredicted RBP21.29■■□□□ 1
YIF1A-212ENST00000528575 YBX2Q9Y2T7 364 aaKnown RBP21.29■■□□□ 1
YIF1A-212ENST00000528575 TET1Q8NFU7 2136 aa21.29■■□□□ 1
YIF1A-212ENST00000528575 NFASCO94856 1347 aa21.29■■□□□ 1
YIF1A-212ENST00000528575 TTC28Q96AY4 2481 aa21.28■■□□□ 1
YIF1A-212ENST00000528575 CTDNEP1O95476 244 aa21.28■■□□□ 1
YIF1A-212ENST00000528575 KCNA2P16389 499 aa21.28■■□□□ 1
YIF1A-212ENST00000528575 CIITAP33076 1130 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms