RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 PTPN11Q06124 597 aaPredicted RBP10.39□□□□□ -0.75
CMTM1-210ENST00000528441 MTMR1Q13613 665 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 JAKMIP3Q5VZ66 844 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 PCNX4Q63HM2 1172 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 PPP1R18Q6NYC8 613 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 OTOP2Q7RTS6 562 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 ZNF713Q8N859 430 aaPredicted RBP10.39□□□□□ -0.75
CMTM1-210ENST00000528441 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.39□□□□□ -0.75
CMTM1-210ENST00000528441 UPF3BQ9BZI7 483 aaKnown RBP10.39□□□□□ -0.75
CMTM1-210ENST00000528441 GLT8D2Q9H1C3 349 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 C6orf50Q9HD87 102 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 IL23AQ9NPF7 189 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 PDRG1Q9NUG6 133 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 DOCK5Q9H7D0 1870 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 GRIN2DO15399 1336 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 C17orf102A2RUQ5 167 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 PIK3CDO00329 1044 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 MEIS2O14770 477 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 SCG2P13521 617 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 CDC27P30260 824 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 RCAN1P53805 252 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 EPHB4P54760 987 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 GHRHRQ02643 423 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 HSDL1Q3SXM5 330 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 MYSM1Q5VVJ2 828 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 XRRA1Q6P2D8 792 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 ZNF365Q70YC5 407 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 RUFY3Q7L099 469 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 SLC43A3Q8NBI5 491 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 GIMAP8Q8ND71 665 aaPredicted RBP10.38□□□□□ -0.75
CMTM1-210ENST00000528441 CCDC148Q8NFR7 591 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 PHKBQ93100 1093 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 SDF4Q9BRK5 362 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 LARP6Q9BRS8 491 aaKnown RBP10.38□□□□□ -0.75
CMTM1-210ENST00000528441 NOC4LQ9BVI4 516 aaKnown RBP10.38□□□□□ -0.75
CMTM1-210ENST00000528441 ANO3Q9BYT9 981 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 HDAC6Q9UBN7 1215 aa10.38□□□□□ -0.75
CMTM1-210ENST00000528441 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-210ENST00000528441 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-210ENST00000528441 DDX39AO00148 427 aaKnown RBP10.37□□□□□ -0.75
CMTM1-210ENST00000528441 STXBP3O00186 592 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 PPFIA4O75335 1185 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 FOSP01100 380 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-210ENST00000528441 LGALS2P05162 132 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 MARK3P27448 753 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 GNA11P29992 359 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 KCNJ6P48051 423 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 NLRP5P59047 1200 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 MRPS9P82933 396 aaKnown RBP10.37□□□□□ -0.75
CMTM1-210ENST00000528441 SSRP1Q08945 709 aaKnown RBP10.37□□□□□ -0.75
CMTM1-210ENST00000528441 GDF6Q6KF10 455 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-210ENST00000528441 METTL7BQ6UX53 244 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 BICD2Q8TD16 824 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 GLG1Q92896 1179 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 EMID1Q96A84 441 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-210ENST00000528441 GPRASP2Q96D09 838 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 NCOA5Q9HCD5 579 aaKnown RBP10.37□□□□□ -0.75
CMTM1-210ENST00000528441 RIC8AQ9NPQ8 531 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 TMEM260Q9NX78 707 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 BARHL2Q9NY43 387 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 MSRAQ9UJ68 235 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 SCN10AQ9Y5Y9 1956 aa10.37□□□□□ -0.75
CMTM1-210ENST00000528441 H3BRB1 525 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 EPB41L2O43491 1005 aaKnown RBP10.36□□□□□ -0.75
CMTM1-210ENST00000528441 RGS20O76081 388 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 F2P00734 622 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 GNAT1P11488 350 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 SMAD3P84022 425 aaKnown RBP10.36□□□□□ -0.75
CMTM1-210ENST00000528441 ARHGAP4P98171 946 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 SP2Q02086 613 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 AP3B2Q13367 1082 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 PFKFB3Q16875 520 aaPredicted RBP10.36□□□□□ -0.75
CMTM1-210ENST00000528441 TMEM240Q5SV17 173 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 REXO1Q8N1G1 1221 aaKnown RBP10.36□□□□□ -0.75
CMTM1-210ENST00000528441 CAGE1Q8TC20 777 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 ATP6V0A1Q93050 837 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 INPP4AQ96PE3 977 aaPredicted RBP10.36□□□□□ -0.75
CMTM1-210ENST00000528441 USP26Q9BXU7 913 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 WNT8AQ9H1J5 351 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 SLKQ9H2G2 1235 aaPredicted RBP10.36□□□□□ -0.75
CMTM1-210ENST00000528441 TUT1Q9H6E5 874 aaKnown RBP10.36□□□□□ -0.75
CMTM1-210ENST00000528441 AZI2Q9H6S1 392 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 GTF2IRD1Q9UHL9 959 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 SLC4A7Q9Y6M7 1214 aa10.36□□□□□ -0.75
CMTM1-210ENST00000528441 FRMPD4Q14CM0 1322 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 KAT6AQ92794 2004 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 SPATA31C2B4DYI2 1134 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 BACH1O14867 736 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 CDKL5O76039 1030 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 PFKMP08237 780 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 CTSHP09668 335 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 XBP1P17861 261 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 DNAJB2P25686 324 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 ICAM3P32942 547 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 RFC2P35250 354 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 TCF7P36402 384 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-210ENST00000528441 THPOP40225 353 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 IGBP1P78318 339 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 RAB30Q15771 203 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms