RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 SP2Q02086 613 aa11□□□□□ -0.65
CHD7-208ENST00000528280 KIAA0753Q2KHM9 967 aa11□□□□□ -0.65
CHD7-208ENST00000528280 HSDL1Q3SXM5 330 aa11□□□□□ -0.65
CHD7-208ENST00000528280 RASIP1Q5U651 963 aa11□□□□□ -0.65
CHD7-208ENST00000528280 RUFY3Q7L099 469 aa11□□□□□ -0.65
CHD7-208ENST00000528280 IL31RAQ8NI17 732 aa11□□□□□ -0.65
CHD7-208ENST00000528280 AFAP1L1Q8TED9 768 aa11□□□□□ -0.65
CHD7-208ENST00000528280 KAT2BQ92831 832 aa11□□□□□ -0.65
CHD7-208ENST00000528280 BRF1Q92994 677 aa11□□□□□ -0.65
CHD7-208ENST00000528280 C1QTNF1Q9BXJ1 281 aa11□□□□□ -0.65
CHD7-208ENST00000528280 AGXT2Q9BYV1 514 aa11□□□□□ -0.65
CHD7-208ENST00000528280 TUT1Q9H6E5 874 aaKnown RBP11□□□□□ -0.65
CHD7-208ENST00000528280 ZSWIM6Q9HCJ5 1215 aa11□□□□□ -0.65
CHD7-208ENST00000528280 BARHL2Q9NY43 387 aa11□□□□□ -0.65
CHD7-208ENST00000528280 GTF2IRD1Q9UHL9 959 aa11□□□□□ -0.65
CHD7-208ENST00000528280 MSRAQ9UJ68 235 aa11□□□□□ -0.65
CHD7-208ENST00000528280 ZNF215Q9UL58 517 aaPredicted RBP11□□□□□ -0.65
CHD7-208ENST00000528280 CYP46A1Q9Y6A2 500 aa11□□□□□ -0.65
CHD7-208ENST00000528280 PRPF3O43395 683 aaKnown RBP10.99□□□□□ -0.65
CHD7-208ENST00000528280 ACRP10323 421 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 GNA11P29992 359 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 ADD1P35611 737 aaKnown RBP10.99□□□□□ -0.65
CHD7-208ENST00000528280 ADCY7P51828 1080 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 EVCP57679 992 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 FUT2Q10981 343 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 PTK7Q13308 1070 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 AP3B2Q13367 1082 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 RAB30Q15771 203 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 PFKFB3Q16875 520 aaPredicted RBP10.99□□□□□ -0.65
CHD7-208ENST00000528280 CYFIP1Q7L576 1253 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 RAB11FIP4Q86YS3 637 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 BICD2Q8TD16 824 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 ADAMTS19Q8TE59 1207 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 TCEANC2Q96MN5 208 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 ASB2Q96Q27 587 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 ALG1Q9BT22 464 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 C6orf50Q9HD87 102 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 JADE2Q9NQC1 790 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 HDAC6Q9UBN7 1215 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 SLC4A7Q9Y6M7 1214 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 SCN10AQ9Y5Y9 1956 aa10.99□□□□□ -0.65
CHD7-208ENST00000528280 hCG_1642624A0A1W2PR95 340 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 SCG2P13521 617 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 SELPP16109 830 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 CDC27P30260 824 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 RBL2Q08999 1139 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 APOBRQ0VD83 1088 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 MTMR1Q13613 665 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 COL9A3Q14050 684 aaPredicted RBP10.98□□□□□ -0.65
CHD7-208ENST00000528280 WWC2Q6AWC2 1192 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 GDF6Q6KF10 455 aaPredicted RBP10.98□□□□□ -0.65
CHD7-208ENST00000528280 CPLX2Q6PUV4 134 aaKnown RBP10.98□□□□□ -0.65
CHD7-208ENST00000528280 OTOP2Q7RTS6 562 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 PHOSPHO2Q8TCD6 241 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 SEPT1Q8WYJ6 367 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 ZNF274Q96GC6 653 aaPredicted RBP10.98□□□□□ -0.65
CHD7-208ENST00000528280 SNX27Q96L92 541 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 GPR20Q99678 358 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 C16orf70Q9BSU1 422 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 FTOQ9C0B1 505 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHD7-208ENST00000528280 WNT8AQ9H1J5 351 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 FAM217BQ9NTX9 383 aaPredicted RBP10.98□□□□□ -0.65
CHD7-208ENST00000528280 UBIAD1Q9Y5Z9 338 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 CNTNAP5Q8WYK1 1306 aa10.98□□□□□ -0.65
CHD7-208ENST00000528280 MYH7BA7E2Y1 1941 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 ESYT2A0FGR8 921 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 C17orf102A2RUQ5 167 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 KIF28PB7ZC32 967 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 STXBP3O00186 592 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 EFCAB14O75071 495 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 CAND2O75155 1236 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 BAIAP3O94812 1187 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 LGALS2P05162 132 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 RPLP2P05387 115 aaKnown RBP10.97□□□□□ -0.65
CHD7-208ENST00000528280 ITGB5P18084 799 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 PDIA3P30101 505 aaKnown RBP10.97□□□□□ -0.65
CHD7-208ENST00000528280 ZNF76P36508 570 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 GRIN2CQ14957 1233 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 NIPA1Q7RTP0 329 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 TRIM22Q8IYM9 498 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 FAM177A1Q8N128 213 aaPredicted RBP10.97□□□□□ -0.65
CHD7-208ENST00000528280 GPKOWQ92917 476 aaPredicted RBP eCLIP10.97□□□□□ -0.65
CHD7-208ENST00000528280 TIFAQ96CG3 184 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 SCLYQ96I15 445 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 ZFP91Q96JP5 570 aaPredicted RBP10.97□□□□□ -0.65
CHD7-208ENST00000528280 UHRF1Q96T88 793 aaPredicted RBP10.97□□□□□ -0.65
CHD7-208ENST00000528280 MXRA8Q9BRK3 442 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 SDF4Q9BRK5 362 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 RNF26Q9BY78 433 aaPredicted RBP10.97□□□□□ -0.65
CHD7-208ENST00000528280 SMARCAD1Q9H4L7 1026 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 UMODL1Q5DID0 1318 aa10.97□□□□□ -0.65
CHD7-208ENST00000528280 NID2Q14112 1375 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 EMSYQ7Z589 1322 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 NRCAMQ92823 1304 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 ZBBXA8MT70 800 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 CPLX1O14810 134 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 ZNF286BP0CG31 522 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 CKBP12277 381 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 CPA1P15085 419 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 IFNAR1P17181 557 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms