RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	BMS1	Q14692	1282 aa	Known RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	LRRC55	Q6ZSA7	311 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	SRGAP1	Q7Z6B7	1085 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	SYN2	Q92777	582 aa	Predicted RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	RPGRIP1	Q96KN7	1286 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	CARD6	Q9BX69	1037 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZNF70	Q9UC06	446 aa	Predicted RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	PRR12	Q9ULL5	1215 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	PLAGL2	Q9UPG8	496 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	KIAA1024	Q9UPX6	916 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	COL4A3BP	Q9Y5P4	624 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	LOXHD1	Q8IVV2	1947 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	PSMD14	O00487	310 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	DDN	O94850	711 aa	Predicted RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	GAP43	P17677	238 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	ARHGAP25	P42331	645 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	MAP3K10	Q02779	954 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	CXCL9	Q07325	125 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	ERCC6L	Q2NKX8	1250 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	KIF4B	Q2VIQ3	1234 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZNF569	Q5MCW4	686 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	RSRC2	Q7L4I2	434 aa	Known RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	DYM	Q7RTS9	669 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	GPBP1	Q86WP2	473 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	SYT2	Q8N9I0	419 aa	Predicted RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	NUDT12	Q9BQG2	462 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	RANBP17	Q9H2T7	1088 aa	Known RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	TUFT1	Q9NNX1	390 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	LUC7L	Q9NQ29	371 aa	Known RBP	11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	LZTFL1	Q9NQ48	299 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	FEM1B	Q9UK73	627 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZBTB21	Q9ULJ3	1066 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	ATAD5	Q96QE3	1844 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	ANO9	A1A5B4	782 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	RAD21	O60216	631 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	GDF11	O95390	407 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	KRT18	P05783	430 aa	Known RBP	11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	CYP11B2	P19099	503 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	SLC12A3	P55017	1021 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	SPIRE1	Q08AE8	756 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	TNIP1	Q15025	636 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	SPA17	Q15506	151 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	CIAPIN1	Q6FI81	312 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	FBXO38	Q6PIJ6	1188 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	KCNK18	Q7Z418	384 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	VCPKMT	Q9H867	229 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	KCND2	Q9NZV8	630 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	SIK3	Q9Y2K2	1263 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZNF541	Q9H0D2	1346 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	COL4A5	P29400	1685 aa		11.31	□□□□□ -0.6
PGAP2-231	ENST00000528216	GLTPD2	A6NH11	291 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	FAM196B	A6NMK8	535 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	FANCG	O15287	622 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	USO1	O60763	962 aa	Known RBP	11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	COBL	O75128	1261 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	ASNS	P08243	561 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	POLR2M	P0CAP2	368 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZNF76	P36508	570 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	SET	Q01105	290 aa	Predicted RBP	11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	BRD3	Q15059	726 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	BMT2	Q1RMZ1	405 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	PRR16	Q569H4	304 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	WDR59	Q6PJI9	974 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	TMCO3	Q6UWJ1	677 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	KRT26	Q7Z3Y9	468 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	KIAA1328	Q86T90	577 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	ACRBP	Q8NEB7	543 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	NEK9	Q8TD19	979 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	LENG9	Q96B70	501 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	SLF1	Q9BQI6	1058 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	WDR11	Q9BZH6	1224 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	MAP3K20	Q9NYL2	800 aa	Known RBP	11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	PCDHA2	Q9Y5H9	948 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	UBE4B	O95155	1302 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	SBF1	O95248	1867 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	SSU72P8	A0A1W2PR75	194 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	POTEB3	A0JP26	581 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	POTEC	B2RU33	542 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	RNF225	M0QZC1	329 aa	Predicted RBP	11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	CETN3	O15182	167 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	LCA5L	O95447	670 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	EYA4	O95677	639 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	CHMP4BP1	P59074	171 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	ECM1	Q16610	540 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	POTEB	Q6S5H4	581 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	KRT222	Q8N1A0	295 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	NEK11	Q8NG66	645 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZBED3	Q96IU2	234 aa	Predicted RBP	11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	CHP1	Q99653	195 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	EMILIN3	Q9NT22	766 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	FAM53C	Q9NYF3	392 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	SEL1L	Q9UBV2	794 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	TRAF3IP3	Q9Y228	551 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	DAAM1	Q9Y4D1	1078 aa		11.3	□□□□□ -0.6

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