RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 PSTPIP2Q9H939 334 aa13.22□□□□□ -0.29
CCDC90B-210ENST00000528149 CD320Q9NPF0 282 aa13.22□□□□□ -0.29
CCDC90B-210ENST00000528149 RIC8AQ9NPQ8 531 aa13.22□□□□□ -0.29
CCDC90B-210ENST00000528149 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
CCDC90B-210ENST00000528149 SH3GLB2Q9NR46 395 aa13.22□□□□□ -0.29
CCDC90B-210ENST00000528149 SLC5A4Q9NY91 659 aa13.22□□□□□ -0.29
CCDC90B-210ENST00000528149 ZDBF2Q9HCK1 2354 aa13.22□□□□□ -0.29
CCDC90B-210ENST00000528149 PRR33A8MZF0 331 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 MEIS2O14770 477 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 ANP32AP39687 249 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 RABGGTBP53611 331 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 GHRHRQ02643 423 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 BECN1Q14457 450 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 NPY5RQ15761 445 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 MORC4Q8TE76 937 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 INTS4Q96HW7 963 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 C8orf76Q96K31 380 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 ZMYND12Q9H0C1 365 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 TMEM260Q9NX78 707 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 CNPY2Q9Y2B0 182 aa13.21□□□□□ -0.29
CCDC90B-210ENST00000528149 RGS20O76081 388 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 AKR1A1P14550 325 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 MYOGP15173 224 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 XBP1P17861 261 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 ACLYP53396 1101 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 TRIM29Q14134 588 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 JAKMIP3Q5VZ66 844 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 KRT40Q6A162 431 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 TMEM199Q8N511 208 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 PHF20Q9BVI0 1012 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 PPP1R12CQ9BZL4 782 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 PXMP2Q9NR77 195 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 KIF3AQ9Y496 699 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 MTCH2Q9Y6C9 303 aa13.2□□□□□ -0.3
CCDC90B-210ENST00000528149 RFXAPO00287 272 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 PIK3CDO00329 1044 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 DAGLBQ8NCG7 672 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 UIMC1Q96RL1 719 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 RMDN3Q96TC7 470 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 FAM184BQ9ULE4 1060 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 PCDHA4Q9UN74 947 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 COG5Q9UP83 839 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 RBM19Q9Y4C8 960 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 ZNF318Q5VUA4 2279 aa13.19□□□□□ -0.3
CCDC90B-210ENST00000528149 WDR81Q562E7 1941 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 MMP1P03956 469 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 MYCLP12524 364 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 GNA11P29992 359 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 KRT2P35908 639 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 TNFAIP2Q03169 654 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 PDE4DQ08499 809 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 CCSAPQ6IQ19 270 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 SEPT14Q6ZU15 432 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 BLIDQ8IZY5 108 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 SAMD3Q8N6K7 520 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 BICD2Q8TD16 824 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 FBXL18Q96ME1 805 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 PDCD2LQ9BRP1 358 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 ANO3Q9BYT9 981 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 MTIF3Q9H2K0 278 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 IL23AQ9NPF7 189 aa13.18□□□□□ -0.3
CCDC90B-210ENST00000528149 TCHHQ07283 1943 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 FRMPD4Q14CM0 1322 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 USP34Q70CQ2 3546 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 CFAP54Q96N23 3096 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 FAM205CA6NFA0 338 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 EPOPA6NHQ4 379 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 ASB14A6NK59 587 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 SPDYE3A6NKU9 549 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 GTPBP6O43824 516 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 C6orf222P0C671 652 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 CYP2C18P33260 490 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 PSMC6P62333 389 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 MRPS9P82933 396 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 NR5A1Q13285 461 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 PGM5Q15124 567 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 LY6KQ17RY6 165 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 ARHGEF16Q5VV41 709 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 OTOP2Q7RTS6 562 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 TLK2Q86UE8 772 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 DIS3L2Q8IYB7 885 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 FAM177A1Q8N128 213 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 MSL3Q8N5Y2 521 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 MAF1Q9H063 256 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 BRMS1Q9HCU9 246 aa13.17□□□□□ -0.3
CCDC90B-210ENST00000528149 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms