RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 TET1Q8NFU7 2136 aa18.2■□□□□ 0.5
CTTN-212ENST00000527962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.2■□□□□ 0.5
CTTN-212ENST00000527962 IGHDP01880 384 aa18.2■□□□□ 0.5
CTTN-212ENST00000527962 HTRA4P83105 476 aaPredicted RBP18.2■□□□□ 0.5
CTTN-212ENST00000527962 WTAPQ15007 396 aa18.2■□□□□ 0.5
CTTN-212ENST00000527962 TCTN1Q2MV58 587 aa18.2■□□□□ 0.5
CTTN-212ENST00000527962 TIGD5Q53EQ6 642 aa18.2■□□□□ 0.5
CTTN-212ENST00000527962 CYB5R4Q7L1T6 521 aa18.2■□□□□ 0.5
CTTN-212ENST00000527962 GIMAP8Q8ND71 665 aaPredicted RBP18.2■□□□□ 0.5
CTTN-212ENST00000527962 MRPL38Q96DV4 380 aaKnown RBP18.2■□□□□ 0.5
CTTN-212ENST00000527962 FAM50BQ9Y247 325 aa18.2■□□□□ 0.5
CTTN-212ENST00000527962 TCF20Q9UGU0 1960 aaKnown RBP18.2■□□□□ 0.5
CTTN-212ENST00000527962 REV3LO60673 3130 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 TRIP12Q14669 1992 aaPredicted RBP18.19■□□□□ 0.5
CTTN-212ENST00000527962 FIBPO43427 364 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 GPR37L1O60883 481 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 KCNA5P22460 613 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 ICAM3P32942 547 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 XRRA1Q6P2D8 792 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 NCOA7Q8NI08 942 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 IL31RAQ8NI17 732 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 SMARCC2Q8TAQ2 1214 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 SP7Q8TDD2 431 aaPredicted RBP18.19■□□□□ 0.5
CTTN-212ENST00000527962 TOP1MTQ969P6 601 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 C17orf80Q9BSJ5 609 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 RNPEPQ9H4A4 650 aa18.19■□□□□ 0.5
CTTN-212ENST00000527962 KIAA1217Q5T5P2 1943 aa18.18■□□□□ 0.5
CTTN-212ENST00000527962 SPATA31C2B4DYI2 1134 aa18.18■□□□□ 0.5
CTTN-212ENST00000527962 TREHO43280 583 aa18.18■□□□□ 0.5
CTTN-212ENST00000527962 HOXC8P31273 242 aa18.18■□□□□ 0.5
CTTN-212ENST00000527962 SSTR3P32745 418 aaPredicted RBP18.18■□□□□ 0.5
CTTN-212ENST00000527962 EPC2Q52LR7 807 aa18.18■□□□□ 0.5
CTTN-212ENST00000527962 CYFIP1Q7L576 1253 aa18.18■□□□□ 0.5
CTTN-212ENST00000527962 NLRX1Q86UT6 975 aa18.18■□□□□ 0.5
CTTN-212ENST00000527962 GJD3Q8N144 294 aa18.18■□□□□ 0.5
CTTN-212ENST00000527962 INPP4AQ96PE3 977 aaPredicted RBP18.18■□□□□ 0.5
CTTN-212ENST00000527962 PI4K2BG5E9Z4 385 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 NCK2O43639 380 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 UPP2O95045 317 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 CTSHP09668 335 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 ALADP13716 330 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 KIF5BP33176 963 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 HIC1Q14526 733 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 PTCRAQ6ISU1 281 aaPredicted RBP18.17■□□□□ 0.5
CTTN-212ENST00000527962 RSPH3Q86UC2 560 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 RRP36Q96EU6 259 aaKnown RBP18.17■□□□□ 0.5
CTTN-212ENST00000527962 ZFP91Q96JP5 570 aaPredicted RBP18.17■□□□□ 0.5
CTTN-212ENST00000527962 GPR20Q99678 358 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 SENP7Q9BQF6 1050 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 IFIH1Q9BYX4 1025 aaKnown RBP18.17■□□□□ 0.5
CTTN-212ENST00000527962 SETD4Q9NVD3 440 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 RTEL1Q9NZ71 1219 aa18.17■□□□□ 0.5
CTTN-212ENST00000527962 SEC63Q9UGP8 760 aaKnown RBP18.17■□□□□ 0.5
CTTN-212ENST00000527962 LAMA4Q16363 1823 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 H3BNC9 293 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 TROAPQ12815 778 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 MKRN4PQ13434 485 aaPredicted RBP18.16■□□□□ 0.5
CTTN-212ENST00000527962 GPM6BQ13491 265 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 FAM178BQ8IXR5 827 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 BANK1Q8NDB2 785 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 CTCFLQ8NI51 663 aaPredicted RBP18.16■□□□□ 0.5
CTTN-212ENST00000527962 GPKOWQ92917 476 aaPredicted RBP eCLIP18.16■□□□□ 0.5
CTTN-212ENST00000527962 CDHR1Q96JP9 859 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 LZTS2Q9BRK4 669 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 RWDD3Q9Y3V2 267 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 NRCAMQ92823 1304 aa18.16■□□□□ 0.5
CTTN-212ENST00000527962 CYP21A2P08686 494 aa18.15■□□□□ 0.5
CTTN-212ENST00000527962 MRPS9P82933 396 aaKnown RBP18.15■□□□□ 0.5
CTTN-212ENST00000527962 ARHGAP4P98171 946 aa18.15■□□□□ 0.5
CTTN-212ENST00000527962 UTP14CQ5TAP6 766 aaKnown RBP18.15■□□□□ 0.5
CTTN-212ENST00000527962 PCNX4Q63HM2 1172 aa18.15■□□□□ 0.5
CTTN-212ENST00000527962 TAF2Q6P1X5 1199 aa18.15■□□□□ 0.5
CTTN-212ENST00000527962 TMEM192Q8IY95 271 aa18.15■□□□□ 0.5
CTTN-212ENST00000527962 IL17RAQ96F46 866 aa18.15■□□□□ 0.5
CTTN-212ENST00000527962 MAP3K14Q99558 947 aa18.15■□□□□ 0.5
CTTN-212ENST00000527962 FRMPD4Q14CM0 1322 aa18.15■□□□□ 0.5
CTTN-212ENST00000527962 CYTH3O43739 400 aa18.14■□□□□ 0.49
CTTN-212ENST00000527962 RPLP2P05387 115 aaKnown RBP18.14■□□□□ 0.49
CTTN-212ENST00000527962 SMARCA1P28370 1054 aa18.14■□□□□ 0.49
CTTN-212ENST00000527962 GNAQP50148 359 aa18.14■□□□□ 0.49
CTTN-212ENST00000527962 FAM26DQ5JW98 314 aa18.14■□□□□ 0.49
CTTN-212ENST00000527962 TTC22Q5TAA0 569 aa18.14■□□□□ 0.49
CTTN-212ENST00000527962 EP400NLQ6ZTU2 488 aa18.14■□□□□ 0.49
CTTN-212ENST00000527962 FIBCD1Q8N539 461 aa18.14■□□□□ 0.49
CTTN-212ENST00000527962 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.14■□□□□ 0.49
CTTN-212ENST00000527962 PIBF1Q8WXW3 757 aa18.14■□□□□ 0.49
CTTN-212ENST00000527962 NSUN3Q9H649 340 aaKnown RBP18.14■□□□□ 0.49
CTTN-212ENST00000527962 GRXCR2A6NFK2 248 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 E7EWF7 191 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 PIK3CDO00329 1044 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 RB1P06400 928 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 SP4Q02446 784 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 CSPP1Q1MSJ5 1256 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 CASC1Q6TDU7 716 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 EXOC6Q8TAG9 804 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 NEK9Q8TD19 979 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 LMBR1Q8WVP7 490 aa18.13■□□□□ 0.49
CTTN-212ENST00000527962 TNPO1Q92973 898 aaKnown RBP18.13■□□□□ 0.49
CTTN-212ENST00000527962 PABPC5Q96DU9 382 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms