RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NBPF5PQ86XG9 351 aaPredicted RBP13.66□□□□□ -0.22
TSKU-203ENST00000527881 GIMAP8Q8ND71 665 aaPredicted RBP13.66□□□□□ -0.22
TSKU-203ENST00000527881 ITFG2Q969R8 447 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 KRT16P08779 473 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 LONP1P36776 959 aaKnown RBP13.65□□□□□ -0.22
TSKU-203ENST00000527881 RASGRP4Q8TDF6 673 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
TSKU-203ENST00000527881 CELF4Q9BZC1 486 aaKnown RBP13.65□□□□□ -0.22
TSKU-203ENST00000527881 ARHGEF10LQ9HCE6 1279 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 MED1Q15648 1581 aaPredicted RBP13.65□□□□□ -0.22
TSKU-203ENST00000527881 DPPA5A6NC42 116 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 TTI1O43156 1089 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 CLSTN1O94985 981 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 SHBGP04278 402 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 ITIH4Q14624 930 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 LRRC14Q15048 493 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 SLC17A8Q8NDX2 589 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 SHISA4Q96DD7 197 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 FAM89AQ96GI7 184 aa13.65□□□□□ -0.22
TSKU-203ENST00000527881 RNF41Q9H4P4 317 aaPredicted RBP13.65□□□□□ -0.22
TSKU-203ENST00000527881 PAEPP09466 180 aa13.65□□□□□ -0.23
TSKU-203ENST00000527881 ITGA6P23229 1130 aa13.65□□□□□ -0.23
TSKU-203ENST00000527881 LTKP29376 864 aa13.65□□□□□ -0.23
TSKU-203ENST00000527881 MSH2P43246 934 aa13.65□□□□□ -0.23
TSKU-203ENST00000527881 ZNF268Q14587 947 aaPredicted RBP13.65□□□□□ -0.23
TSKU-203ENST00000527881 DENND2CQ68D51 928 aa13.65□□□□□ -0.23
TSKU-203ENST00000527881 HELBQ8NG08 1087 aaPredicted RBP13.65□□□□□ -0.23
TSKU-203ENST00000527881 FMO2Q99518 471 aa13.65□□□□□ -0.23
TSKU-203ENST00000527881 AZI2Q9H6S1 392 aa13.65□□□□□ -0.23
TSKU-203ENST00000527881 TRIM33Q9UPN9 1127 aa13.65□□□□□ -0.23
TSKU-203ENST00000527881 CCDC194A0A1B0GVG4 234 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 PGRMC1O00264 195 aaKnown RBP13.64□□□□□ -0.23
TSKU-203ENST00000527881 PYGLP06737 847 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 FESP07332 822 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 GBP1P32455 592 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 EPS15P42566 896 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 POLR2FP61218 127 aaKnown RBP13.64□□□□□ -0.23
TSKU-203ENST00000527881 NCALDP61601 193 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 PKN1Q16512 942 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 CCDC38Q502W7 563 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 FIGNQ5HY92 759 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
TSKU-203ENST00000527881 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 ESR2Q92731 530 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 PACSIN1Q9BY11 444 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 LRRC4CQ9HCJ2 640 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 NWD2Q9ULI1 1742 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 F8VZ95 297 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 H0Y3Z8 333 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 RHOBTB3O94955 611 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 PHKA1P46020 1223 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 CEBPAP49715 358 aaPredicted RBP13.64□□□□□ -0.23
TSKU-203ENST00000527881 KLHL30Q0D2K2 578 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 TMC3Q7Z5M5 1100 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 B4GALNT2Q8NHY0 566 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.64□□□□□ -0.23
TSKU-203ENST00000527881 IQCDQ96DY2 449 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 MLXIPLQ9NP71 852 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 PCDHGC5Q9Y5F6 944 aa13.64□□□□□ -0.23
TSKU-203ENST00000527881 SUN1O94901 812 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 ABL2P42684 1182 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 SEPT2Q15019 361 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 CWF19L1Q69YN2 538 aaKnown RBP13.63□□□□□ -0.23
TSKU-203ENST00000527881 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 TACC3Q9Y6A5 838 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 TSPOAP1O95153 1857 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 ASAP2O43150 1006 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 PJA2O43164 708 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 RAD23BP54727 409 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 CABP4P57796 275 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 MEI1Q5TIA1 1274 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 MFN1Q8IWA4 741 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 PAIP2Q9BPZ3 127 aaKnown RBP13.63□□□□□ -0.23
TSKU-203ENST00000527881 TRIM51Q9BSJ1 452 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 NOC2LQ9Y3T9 749 aaKnown RBP13.63□□□□□ -0.23
TSKU-203ENST00000527881 ITGA4P13612 1032 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 ARID4AP29374 1257 aaPredicted RBP13.63□□□□□ -0.23
TSKU-203ENST00000527881 NAB2Q15742 525 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 MAN2A1Q16706 1144 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 LONP2Q86WA8 852 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 DNAAF5Q86Y56 855 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 TMX4Q9H1E5 349 aaPredicted RBP13.63□□□□□ -0.23
TSKU-203ENST00000527881 TCP11L1Q9NUJ3 509 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
TSKU-203ENST00000527881 BSDC1Q9NW68 430 aaPredicted RBP13.63□□□□□ -0.23
TSKU-203ENST00000527881 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.63□□□□□ -0.23
TSKU-203ENST00000527881 RTN3O95197 1032 aaPredicted RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 PDE6CP51160 858 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 COPS2P61201 443 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 ROR2Q01974 943 aaKnown RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 NUGGCQ68CJ6 796 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 ANKRD42Q8N9B4 389 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 MTFR1LQ9H019 292 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 MYO5AQ9Y4I1 1855 aaKnown RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 SPDYE5A6NIY4 337 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms