RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 PSMD1Q99460 953 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 TUBB2BQ9BVA1 445 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 ARFGAP3Q9NP61 516 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 CWC15Q9P013 229 aaKnown RBP16.54■□□□□ 0.24
USP47-207ENST00000527733 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 FCER1AP12319 257 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 CAP2P40123 477 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 TNNC1P63316 161 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 TAF12Q16514 161 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 ZMYND12Q9H0C1 365 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 POTEB3A0JP26 581 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 POTECB2RU33 542 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 E9PMD0 336 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 CLIC2O15247 247 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 SEL1L2Q5TEA6 688 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 POTEBQ6S5H4 581 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 RSPH3Q86UC2 560 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 C17orf53Q8N3J3 647 aaPredicted RBP16.53■□□□□ 0.24
USP47-207ENST00000527733 RAD54LQ92698 747 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
USP47-207ENST00000527733 P4HBP07237 508 aaKnown RBP16.53■□□□□ 0.24
USP47-207ENST00000527733 C9orf131Q5VYM1 1079 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 MCPH1Q8NEM0 835 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 THAP9Q9H5L6 903 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 FBXO2Q9UK22 296 aaPredicted RBP16.53■□□□□ 0.24
USP47-207ENST00000527733 GDAQ9Y2T3 454 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 PDIA5Q14554 519 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 SEC23AQ15436 765 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 FAM167AQ96KS9 214 aa16.53■□□□□ 0.24
USP47-207ENST00000527733 RIC1Q4ADV7 1423 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 ESYT2A0FGR8 921 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 PALM3A6NDB9 673 aaPredicted RBP16.52■□□□□ 0.24
USP47-207ENST00000527733 DDTLA6NHG4 134 aaPredicted RBP16.52■□□□□ 0.24
USP47-207ENST00000527733 PP2D1A8MPX8 630 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 QARSP47897 775 aaKnown RBP16.52■□□□□ 0.24
USP47-207ENST00000527733 CRY2Q49AN0 593 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 LRRC8AQ8IWT6 810 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 NAP1L3Q99457 506 aaPredicted RBP16.52■□□□□ 0.24
USP47-207ENST00000527733 MAD2L2Q9UI95 211 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 TUBBP07437 444 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 CDC25BP30305 580 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 FAM83AQ86UY5 434 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 RNF169Q8NCN4 708 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 DYDC2Q96IM9 177 aa16.52■□□□□ 0.24
USP47-207ENST00000527733 AFPP02771 609 aaKnown RBP16.52■□□□□ 0.23
USP47-207ENST00000527733 MYZAPP0CAP1 466 aa16.52■□□□□ 0.23
USP47-207ENST00000527733 FKBP1AP62942 108 aaKnown RBP16.52■□□□□ 0.23
USP47-207ENST00000527733 RASSF7Q02833 373 aa16.52■□□□□ 0.23
USP47-207ENST00000527733 DCUN1D2Q6PH85 259 aa16.52■□□□□ 0.23
USP47-207ENST00000527733 SCYL3Q8IZE3 742 aa16.52■□□□□ 0.23
USP47-207ENST00000527733 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.52■□□□□ 0.23
USP47-207ENST00000527733 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.52■□□□□ 0.23
USP47-207ENST00000527733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.52■□□□□ 0.23
USP47-207ENST00000527733 V9GYY5 206 aaPredicted RBP16.52■□□□□ 0.23
USP47-207ENST00000527733 CASP1P29466 404 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 NBPF9Q3BBW0 867 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 GSTA5Q7RTV2 222 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 BANK1Q8NDB2 785 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 MMP19Q99542 508 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 ADARB2Q9NS39 739 aaKnown RBP16.51■□□□□ 0.23
USP47-207ENST00000527733 LMAN1P49257 510 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 TKFCQ3LXA3 575 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 PADI6Q6TGC4 694 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 CCSER1Q9C0I3 900 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 ZEB2O60315 1214 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 CASP14P31944 242 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 MYL7Q01449 175 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 BAATQ14032 418 aaPredicted RBP16.51■□□□□ 0.23
USP47-207ENST00000527733 BMS1Q14692 1282 aaKnown RBP16.51■□□□□ 0.23
USP47-207ENST00000527733 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
USP47-207ENST00000527733 AGXT2Q9BYV1 514 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 K7ERI5 159 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 SNAPC2Q13487 334 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 MAATS1Q7Z4T9 603 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
USP47-207ENST00000527733 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 POTEFA5A3E0 1075 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 MARK3P27448 753 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 PEX3P56589 373 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 TTLL4Q14679 1199 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 POTEEQ6S8J3 1075 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 POTEAQ6S8J7 498 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 UBL4BQ8N7F7 174 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 SFI1A8K8P3 1242 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 DYDC1Q8WWB3 177 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 NT5C1BQ96P26 610 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 BCCIPQ9P287 314 aaKnown RBP eCLIP16.5■□□□□ 0.23
USP47-207ENST00000527733 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 ROBO1Q9Y6N7 1651 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 EPHA7Q15375 998 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 SYCE1Q8N0S2 351 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 ACER1Q8TDN7 264 aa16.5■□□□□ 0.23
USP47-207ENST00000527733 ATF7P17544 494 aaPredicted RBP16.49■□□□□ 0.23
USP47-207ENST00000527733 SEMA3FQ13275 785 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 DESI2Q9BSY9 194 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms