RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SETQ01105 290 aaPredicted RBP14.68□□□□□ -0.06
SMPD1-202ENST00000526280 LETM2Q2VYF4 491 aa14.68□□□□□ -0.06
SMPD1-202ENST00000526280 HSDL1Q3SXM5 330 aa14.68□□□□□ -0.06
SMPD1-202ENST00000526280 Q4G0T1 1027 aa14.68□□□□□ -0.06
SMPD1-202ENST00000526280 PPP4R3AQ6IN85 833 aa14.68□□□□□ -0.06
SMPD1-202ENST00000526280 SPATA33Q96N06 139 aa14.68□□□□□ -0.06
SMPD1-202ENST00000526280 SENP6Q9GZR1 1112 aaPredicted RBP14.68□□□□□ -0.06
SMPD1-202ENST00000526280 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
SMPD1-202ENST00000526280 NFASCO94856 1347 aa14.68□□□□□ -0.06
SMPD1-202ENST00000526280 A0A1W2PQ45 241 aaPredicted RBP14.67□□□□□ -0.06
SMPD1-202ENST00000526280 A0A1W2PQY0 241 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 KIF28PB7ZC32 967 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 KPNA6O60684 536 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 PPFIA4O75335 1185 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 TDP2O95551 362 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 MMP3P08254 477 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 GCFC2P16383 781 aaKnown RBP14.67□□□□□ -0.06
SMPD1-202ENST00000526280 PDCP20941 246 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 ITGB3BPQ13352 177 aaPredicted RBP14.67□□□□□ -0.06
SMPD1-202ENST00000526280 NOSTRINQ8IVI9 506 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 FERMT2Q96AC1 680 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 PKD2L1Q9P0L9 805 aa14.67□□□□□ -0.06
SMPD1-202ENST00000526280 IPO5O00410 1097 aaKnown RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 MSH4O15457 936 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 DHX15O43143 795 aaKnown RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 CABYRO75952 493 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 HSP90AA1P07900 732 aaKnown RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 HOXD8P13378 290 aaPredicted RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 PURAQ00577 322 aaKnown RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 GNL2Q13823 731 aaKnown RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 DGKDQ16760 1214 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 CXCL17Q6UXB2 119 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 NAP1L4Q99733 375 aaKnown RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 SDF4Q9BRK5 362 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 ZNF577Q9BSK1 485 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 POLR3EQ9NVU0 708 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 DDX25Q9UHL0 483 aaKnown RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 DOCK5Q9H7D0 1870 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 DNAH12Q6ZR08 3092 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 ELP1O95163 1332 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 SLC37A4O43826 429 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 CCNT1O60563 726 aaKnown RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 MYL3P08590 195 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 SYT1P21579 422 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 MCTP1Q6DN14 999 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 GLT1D1Q96MS3 346 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 UIMC1Q96RL1 719 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 GPR20Q99678 358 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 MTG1Q9BT17 334 aaPredicted RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 JPH1Q9HDC5 661 aaPredicted RBP14.66□□□□□ -0.06
SMPD1-202ENST00000526280 TBC1D22BQ9NU19 505 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 SLC9A2Q9UBY0 812 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 TELO2Q9Y4R8 837 aa14.66□□□□□ -0.06
SMPD1-202ENST00000526280 TNRC18O15417 2968 aaPredicted RBP14.65□□□□□ -0.06
SMPD1-202ENST00000526280 NOP56O00567 594 aaKnown RBP14.65□□□□□ -0.06
SMPD1-202ENST00000526280 WNT7AO00755 349 aa14.65□□□□□ -0.06
SMPD1-202ENST00000526280 SLC39A5Q6ZMH5 540 aa14.65□□□□□ -0.06
SMPD1-202ENST00000526280 ETNPPLQ8TBG4 499 aa14.65□□□□□ -0.06
SMPD1-202ENST00000526280 SLC5A5Q92911 643 aa14.65□□□□□ -0.06
SMPD1-202ENST00000526280 VTI1AQ96AJ9 217 aa14.65□□□□□ -0.06
SMPD1-202ENST00000526280 RIT2Q99578 217 aa14.65□□□□□ -0.06
SMPD1-202ENST00000526280 STARD7Q9NQZ5 370 aa14.65□□□□□ -0.06
SMPD1-202ENST00000526280 GSTTP1A0A1W2PQM5 241 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 TRAPPC10P48553 1259 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 ATN1P54259 1190 aaPredicted RBP14.64□□□□□ -0.07
SMPD1-202ENST00000526280 SP4Q02446 784 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 BECN1Q14457 450 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 SNX17Q15036 470 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 C1orf53Q5VUE5 145 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 SEPT1Q8WYJ6 367 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 KAT2BQ92831 832 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 FAM20AQ96MK3 541 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 HTATIP2Q9BUP3 242 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 KCNMB3Q9NPA1 279 aa14.64□□□□□ -0.07
SMPD1-202ENST00000526280 GRIN2DO15399 1336 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 A0A0U1RQG5 324 aaPredicted RBP14.63□□□□□ -0.07
SMPD1-202ENST00000526280 VPS37CA5D8V6 355 aaPredicted RBP14.63□□□□□ -0.07
SMPD1-202ENST00000526280 DDX39AO00148 427 aaKnown RBP14.63□□□□□ -0.07
SMPD1-202ENST00000526280 TBX3O15119 743 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 PSMD10O75832 226 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 ATG7O95352 703 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 CCNE2O96020 404 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 ATP2B1P20020 1258 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 CDK7P50613 346 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 TOB1P50616 345 aaPredicted RBP14.63□□□□□ -0.07
SMPD1-202ENST00000526280 ACTR2P61160 394 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 LRRC26Q2I0M4 334 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 LRCH2Q5VUJ6 765 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 ZNF746Q6NUN9 644 aaPredicted RBP14.63□□□□□ -0.07
SMPD1-202ENST00000526280 SLC43A3Q8NBI5 491 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 SPRYD3Q8NCJ5 442 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 HAS1Q92839 578 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 GJA10Q969M2 543 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 C16orf70Q9BSU1 422 aa14.63□□□□□ -0.07
SMPD1-202ENST00000526280 NOL7Q9UMY1 257 aaKnown RBP14.63□□□□□ -0.07
SMPD1-202ENST00000526280 SCN10AQ9Y5Y9 1956 aa14.62□□□□□ -0.07
SMPD1-202ENST00000526280 ARVCFO00192 962 aa14.62□□□□□ -0.07
SMPD1-202ENST00000526280 STX6O43752 255 aa14.62□□□□□ -0.07
SMPD1-202ENST00000526280 GAS7O60861 476 aa14.62□□□□□ -0.07
SMPD1-202ENST00000526280 F2P00734 622 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms