RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-215	ENST00000525948		M0R296	226 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	UPP2	O95045	317 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	RSPH10B	P0C881	870 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	TOP1	P11387	765 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	CTNNB1	P35222	781 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	THPO	P40225	353 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	SMAD4	Q13485	552 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	ZMYM1	Q5SVZ6	1142 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	DHX37	Q8IY37	1157 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	TBC1D5	Q92609	795 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	EDA	Q92838	391 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	TOP1MT	Q969P6	601 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	EMID1	Q96A84	441 aa	Predicted RBP	11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	GPATCH3	Q96I76	525 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	TAAR1	Q96RJ0	339 aa		11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	ALG13	Q9NP73	1137 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	DDX41	Q9UJV9	622 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-215	ENST00000525948	STXBP3	O00186	592 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	GRM6	O15303	877 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	LINC01565	O15544	149 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	ORC4	O43929	436 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	GFRA3	O60609	400 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	CTSH	P09668	335 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	LINC00271	P0C7V0	271 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	ZNF543	Q08ER8	600 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	TRIM67	Q6ZTA4	783 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	BMP8A	Q7Z5Y6	402 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	SERINC5	Q86VE9	423 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	PPTC7	Q8NI37	304 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	PBXIP1	Q96AQ6	731 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	IFIH1	Q9BYX4	1025 aa	Known RBP	11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	CPVL	Q9H3G5	476 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	PNMA2	Q9UL42	364 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	PLXNA4	Q9HCM2	1894 aa		11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.97	□□□□□ -0.49
PUM1-215	ENST00000525948	DCHS1	Q96JQ0	3298 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	LAMA4	Q16363	1823 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	SORBS3	O60504	671 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	SNHG28	P0DPA3	235 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	HOXD8	P13378	290 aa	Predicted RBP	11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	EIF2AK2	P19525	551 aa	Known RBP	11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	STXBP2	Q15833	593 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	RRP12	Q5JTH9	1297 aa	Known RBP	11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	VPS53	Q5VIR6	699 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	SEPT8	Q92599	483 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	FSD1	Q9BTV5	496 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	TOMM22	Q9NS69	142 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	CD207	Q9UJ71	328 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	ANAPC4	Q9UJX5	808 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	MRVI1	Q9Y6F6	885 aa		11.96	□□□□□ -0.49
PUM1-215	ENST00000525948	CACNA1A	O00555	2505 aa		11.96	□□□□□ -0.5
PUM1-215	ENST00000525948	ADGRA3	Q8IWK6	1321 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	C2orf72	A6NCS6	295 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	C5orf67	F2Z3F1	127 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	NCK2	O43639	380 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	FGR	P09769	529 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	GOLGA8H	P0CJ92	632 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	HOXC8	P31273	242 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	VCP	P55072	806 aa	Known RBP	11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	CDC37	Q16543	378 aa	Predicted RBP	11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	HSDL1	Q3SXM5	330 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	SUGP1	Q8IWZ8	645 aa	Known RBP	11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	RGS22	Q8NE09	1264 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	PI4K2B	Q8TCG2	481 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	NSUN6	Q8TEA1	469 aa	Known RBP	11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	RMDN3	Q96TC7	470 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	LMAN2L	Q9H0V9	348 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	IGFLR1	Q9H665	355 aa		11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	RC3H2	Q9HBD1	1191 aa	Known RBP	11.95	□□□□□ -0.5
PUM1-215	ENST00000525948	TTC3	P53804	2025 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	KAT6A	Q92794	2004 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	ABCB11	O95342	1321 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	TREH	O43280	583 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	MS4A1	P11836	297 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	ZXDA	P98168	799 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	LAMC2	Q13753	1193 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	ZNF710	Q8N1W2	664 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	FBXL6	Q8N531	539 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	FIBCD1	Q8N539	461 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	ATP6V0A1	Q93050	837 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	MSLNL	Q96KJ4	702 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	IWS1	Q96ST2	819 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	PRRX2	Q99811	253 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	C16orf70	Q9BSU1	422 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	TCP11L1	Q9NUJ3	509 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	LOXHD1	Q8IVV2	1947 aa		11.94	□□□□□ -0.5
PUM1-215	ENST00000525948	C17orf102	A2RUQ5	167 aa		11.93	□□□□□ -0.5
PUM1-215	ENST00000525948	RGS20	O76081	388 aa		11.93	□□□□□ -0.5
PUM1-215	ENST00000525948	GGPS1	O95749	300 aa		11.93	□□□□□ -0.5
PUM1-215	ENST00000525948	MMP1	P03956	469 aa		11.93	□□□□□ -0.5
PUM1-215	ENST00000525948	BMPR1A	P36894	532 aa		11.93	□□□□□ -0.5
PUM1-215	ENST00000525948	NDUFV1	P49821	464 aa		11.93	□□□□□ -0.5
PUM1-215	ENST00000525948	LCE2D	Q5TA82	110 aa	Predicted RBP	11.93	□□□□□ -0.5
PUM1-215	ENST00000525948	ARHGEF16	Q5VV41	709 aa		11.93	□□□□□ -0.5
PUM1-215	ENST00000525948	MYSM1	Q5VVJ2	828 aa		11.93	□□□□□ -0.5
PUM1-215	ENST00000525948	SPRYD3	Q8NCJ5	442 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms