RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 SPATA33Q96N06 139 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 RIT2Q99578 217 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 SDF4Q9BRK5 362 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 BRCA2P51587 3418 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 MYADML2A6NDP7 307 aa14.04□□□□□ -0.16
CCS-202ENST00000525435 TBX3O15119 743 aa14.04□□□□□ -0.16
CCS-202ENST00000525435 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
CCS-202ENST00000525435 ASGR1P07306 291 aa14.04□□□□□ -0.16
CCS-202ENST00000525435 HSP90AA1P07900 732 aaKnown RBP14.04□□□□□ -0.16
CCS-202ENST00000525435 ORC2Q13416 577 aaPredicted RBP14.04□□□□□ -0.16
CCS-202ENST00000525435 GNL2Q13823 731 aaKnown RBP14.04□□□□□ -0.16
CCS-202ENST00000525435 BECN1Q14457 450 aa14.04□□□□□ -0.16
CCS-202ENST00000525435 LETM2Q2VYF4 491 aa14.04□□□□□ -0.16
CCS-202ENST00000525435 CYFIP1Q7L576 1253 aa14.04□□□□□ -0.16
CCS-202ENST00000525435 FAM20AQ96MK3 541 aa14.04□□□□□ -0.16
CCS-202ENST00000525435 MTG1Q9BT17 334 aaPredicted RBP14.04□□□□□ -0.16
CCS-202ENST00000525435 HTATIP2Q9BUP3 242 aa14.04□□□□□ -0.16
CCS-202ENST00000525435 SENP6Q9GZR1 1112 aaPredicted RBP14.04□□□□□ -0.16
CCS-202ENST00000525435 NOP56O00567 594 aaKnown RBP14.03□□□□□ -0.16
CCS-202ENST00000525435 MMP3P08254 477 aa14.03□□□□□ -0.16
CCS-202ENST00000525435 FOSBP53539 338 aa14.03□□□□□ -0.16
CCS-202ENST00000525435 PURAQ00577 322 aaKnown RBP14.03□□□□□ -0.16
CCS-202ENST00000525435 BEX3Q00994 111 aa14.03□□□□□ -0.16
CCS-202ENST00000525435 HSDL1Q3SXM5 330 aa14.03□□□□□ -0.16
CCS-202ENST00000525435 EARS2Q5JPH6 523 aaKnown RBP14.03□□□□□ -0.16
CCS-202ENST00000525435 DIS3LQ8TF46 1054 aaKnown RBP14.03□□□□□ -0.16
CCS-202ENST00000525435 SEPT1Q8WYJ6 367 aa14.03□□□□□ -0.16
CCS-202ENST00000525435 ZNF577Q9BSK1 485 aa14.03□□□□□ -0.16
CCS-202ENST00000525435 JPH1Q9HDC5 661 aaPredicted RBP14.03□□□□□ -0.16
CCS-202ENST00000525435 SLC9A2Q9UBY0 812 aa14.03□□□□□ -0.16
CCS-202ENST00000525435 DDX25Q9UHL0 483 aaKnown RBP14.03□□□□□ -0.16
CCS-202ENST00000525435 LRRC37A2A6NM11 1700 aa14.02□□□□□ -0.16
CCS-202ENST00000525435 A0A1W2PQ45 241 aaPredicted RBP14.02□□□□□ -0.17
CCS-202ENST00000525435 A0A1W2PQY0 241 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 MSH4O15457 936 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 DHX15O43143 795 aaKnown RBP14.02□□□□□ -0.17
CCS-202ENST00000525435 CCNT1O60563 726 aaKnown RBP14.02□□□□□ -0.17
CCS-202ENST00000525435 SNX17Q15036 470 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 CXCL17Q6UXB2 119 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 SLC39A5Q6ZMH5 540 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 SLFN12Q8IYM2 578 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 SLC5A5Q92911 643 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 GPR20Q99678 358 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 KATNAL1Q9BW62 490 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 KCNMB3Q9NPA1 279 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 STARD7Q9NQZ5 370 aa14.02□□□□□ -0.17
CCS-202ENST00000525435 NOL7Q9UMY1 257 aaKnown RBP14.02□□□□□ -0.17
CCS-202ENST00000525435 ATG7O95352 703 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 BAG4O95429 457 aaKnown RBP14.01□□□□□ -0.17
CCS-202ENST00000525435 TDP2O95551 362 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 MYL3P08590 195 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 SYT1P21579 422 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 PTGS1P23219 599 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
CCS-202ENST00000525435 KRT76Q01546 638 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 ITGB3BPQ13352 177 aaPredicted RBP14.01□□□□□ -0.17
CCS-202ENST00000525435 RILPL1Q5EBL4 403 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 MCTP1Q6DN14 999 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 ZNF746Q6NUN9 644 aaPredicted RBP14.01□□□□□ -0.17
CCS-202ENST00000525435 BRAPQ7Z569 592 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
CCS-202ENST00000525435 SLC43A3Q8NBI5 491 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 ETNPPLQ8TBG4 499 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 VTI1AQ96AJ9 217 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 TOX2Q96NM4 488 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 BCAS3Q9H6U6 928 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 TCEAL9Q9UHQ7 104 aa14.01□□□□□ -0.17
CCS-202ENST00000525435 KIAA1217Q5T5P2 1943 aa14□□□□□ -0.17
CCS-202ENST00000525435 MROH7Q68CQ1 1323 aa14□□□□□ -0.17
CCS-202ENST00000525435 A0A0U1RQG5 324 aaPredicted RBP14□□□□□ -0.17
CCS-202ENST00000525435 GSTTP1A0A1W2PQM5 241 aa14□□□□□ -0.17
CCS-202ENST00000525435 PSMD10O75832 226 aa14□□□□□ -0.17
CCS-202ENST00000525435 CDK7P50613 346 aa14□□□□□ -0.17
CCS-202ENST00000525435 PTPN11Q06124 597 aaPredicted RBP14□□□□□ -0.17
CCS-202ENST00000525435 NFRKBQ6P4R8 1299 aa14□□□□□ -0.17
CCS-202ENST00000525435 ANKRD33Q7Z3H0 272 aa14□□□□□ -0.17
CCS-202ENST00000525435 RDM1Q8NG50 284 aa14□□□□□ -0.17
CCS-202ENST00000525435 FERMT2Q96AC1 680 aa14□□□□□ -0.17
CCS-202ENST00000525435 C16orf70Q9BSU1 422 aa14□□□□□ -0.17
CCS-202ENST00000525435 FAM205CA6NFA0 338 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 KIF28PB7ZC32 967 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 H3BRB1 525 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 ARVCFO00192 962 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 HAS3O00219 553 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 STX6O43752 255 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 NEMFO60524 1076 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 GAS7O60861 476 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 LGR5O75473 907 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 F2P00734 622 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 SFNP31947 248 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 SLC26A2P50443 739 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 ACTR2P61160 394 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 ITGA7Q13683 1181 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 LRCH2Q5VUJ6 765 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 B3GNT9Q6UX72 402 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 PLPPR4Q7Z2D5 763 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 KAT2BQ92831 832 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 TNPO1Q92973 898 aaKnown RBP13.99□□□□□ -0.17
CCS-202ENST00000525435 TEKT3Q9BXF9 490 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms