RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 MMRN2Q9H8L6 949 aa12.35□□□□□ -0.43
CLNS1A-204ENST00000525428 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
CLNS1A-204ENST00000525428 CWC25Q9NXE8 425 aaPredicted RBP12.35□□□□□ -0.43
CLNS1A-204ENST00000525428 ZSWIM5Q9P217 1185 aa12.35□□□□□ -0.43
CLNS1A-204ENST00000525428 NFS1Q9Y697 457 aa12.35□□□□□ -0.43
CLNS1A-204ENST00000525428 ATRNO75882 1429 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 ONECUT3O60422 494 aaPredicted RBP12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 PALMO75781 387 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 KRT16P08779 473 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 SRGNP10124 158 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 NQO1P15559 274 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 PCK1P35558 622 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 SLC1A4P43007 532 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 PTGDRQ13258 359 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 TCIRG1Q13488 830 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 ARMC9Q7Z3E5 817 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 LRRC34Q8IZ02 419 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 KLHL29Q96CT2 875 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 NAF1Q96HR8 494 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 NOX5Q96PH1 765 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 NOC4LQ9BVI4 516 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 SAMD15Q9P1V8 674 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 SRP68Q9UHB9 627 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 SLC4A4Q9Y6R1 1079 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 PDS5AQ29RF7 1337 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 SRRM3A6NNA2 597 aaPredicted RBP12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 H7C1W4 665 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 RTN1Q16799 776 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 TDRD12Q587J7 1177 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 RRAGAQ7L523 313 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 P3H4Q92791 437 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 TTYH3Q9C0H2 523 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 GOLPH3Q9H4A6 298 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 ECT2Q9H8V3 914 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
CLNS1A-204ENST00000525428 LRRD1A4D1F6 860 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 A6NHS1 94 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 STXBP3O00186 592 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 PYGBP11216 843 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 CHN1P15882 459 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 FERP16591 822 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 BIRC3Q13489 604 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 RIPK1Q13546 671 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 ZNF268Q14587 947 aaPredicted RBP12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 APPBP2Q92624 585 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 PSMD1Q99460 953 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 CCDC113Q9H0I3 377 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 SWAP70Q9UH65 585 aa12.33□□□□□ -0.43
CLNS1A-204ENST00000525428 GNPATO15228 680 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 IFNAR1P17181 557 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 CCND1P24385 295 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 MCM7P33993 719 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 ROR2Q01974 943 aaKnown RBP12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 KLHL23Q8NBE8 558 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 PAIP2Q9BPZ3 127 aaKnown RBP12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 IDH1O75874 414 aaKnown RBP12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 SLMAPQ14BN4 828 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 TAX1BP1Q86VP1 789 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 LONP2Q86WA8 852 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 MFN1Q8IWA4 741 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 UHMK1Q8TAS1 419 aaKnown RBP12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 PRMT1Q99873 361 aaKnown RBP12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 RGL1Q9NZL6 768 aa12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 ZMYND8Q9ULU4 1186 aaPredicted RBP12.33□□□□□ -0.44
CLNS1A-204ENST00000525428 GTPBP6O43824 516 aaPredicted RBP12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 EEF1GP26641 437 aaKnown RBP12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 CNBD1Q8NA66 436 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 LRRC45Q96CN5 670 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 DPH5Q9H2P9 285 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 ATP8A1Q9Y2Q0 1164 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 DAPK3O43293 454 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 LUC7L3O95232 432 aaKnown RBP12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 CASP7P55210 303 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 NCALDP61601 193 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 ARID5AQ03989 594 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 DHX9Q08211 1270 aaKnown RBP12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 ERMARDQ5T6L9 678 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 RNF220Q5VTB9 566 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 ADSSL1Q8N142 457 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 CNOT6LQ96LI5 555 aaKnown RBP12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 DDX47Q9H0S4 455 aaKnown RBP12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 TRMT112Q9UI30 125 aaKnown RBP12.32□□□□□ -0.44
CLNS1A-204ENST00000525428 CFAP73A6NFT4 308 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 LRRC53A6NM62 1247 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 KCNK3O14649 394 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 RNF8O76064 485 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 ECHS1P30084 290 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 IL6STP40189 918 aaPredicted RBP12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 RNASELQ05823 741 aaKnown RBP12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 PDXDC2PQ6P474 469 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 LRIG3Q6UXM1 1119 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 CNKSR1Q969H4 720 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 TMEM87BQ96K49 555 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 SYT15Q9BQS2 421 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 FAM129AQ9BZQ8 928 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 ADAM22Q9P0K1 906 aa12.31□□□□□ -0.44
CLNS1A-204ENST00000525428 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms