RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 KCNA2P16389 499 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 SREBF1P36956 1147 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 CCL23P55773 120 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 SP4Q02446 784 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 GDF6Q6KF10 455 aaPredicted RBP21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 TRIM22Q8IYM9 498 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 C7orf31Q8N865 590 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 GIMAP8Q8ND71 665 aaPredicted RBP21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 GPR20Q99678 358 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 MXRA8Q9BRK3 442 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 PKD2L1Q9P0L9 805 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 VPS54Q9P1Q0 977 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 HDAC6Q9UBN7 1215 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 GTF2IRD1Q9UHL9 959 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 TPCN1Q9ULQ1 816 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 NOD1Q9Y239 953 aa21.15■□□□□ 0.98
TSPAN4-215ENST00000525334 LAMA2P24043 3122 aaKnown RBP21.14■□□□□ 0.98
TSPAN4-215ENST00000525334 LGALS2P05162 132 aa21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 AK2P54819 239 aa21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 SSRP1Q08945 709 aaKnown RBP21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 SCRN1Q12765 414 aa21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 PTGISQ16647 500 aa21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 C16orf59Q7L2K0 433 aa21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 REXO1Q8N1G1 1221 aaKnown RBP21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 DEFB123Q8N688 67 aa21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 CCDC148Q8NFR7 591 aa21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 CYP2W1Q8TAV3 490 aa21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 RNPC3Q96LT9 517 aaKnown RBP21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 CTAGE1Q96RT6 745 aa21.14■□□□□ 0.97
TSPAN4-215ENST00000525334 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.14■□□□□ 0.972e-12■□□□□ 9.2
TSPAN4-215ENST00000525334 MAFGO15525 162 aa21.13■□□□□ 0.97
TSPAN4-215ENST00000525334 ACRP10323 421 aa21.13■□□□□ 0.97
TSPAN4-215ENST00000525334 GNA11P29992 359 aa21.13■□□□□ 0.97
TSPAN4-215ENST00000525334 ARHGAP4P98171 946 aa21.13■□□□□ 0.97
TSPAN4-215ENST00000525334 ANKRD1Q15327 319 aa21.13■□□□□ 0.97
TSPAN4-215ENST00000525334 C8orf34Q49A92 452 aa21.13■□□□□ 0.97
TSPAN4-215ENST00000525334 FAM109BQ6ICB4 259 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-215ENST00000525334 CPLX2Q6PUV4 134 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-215ENST00000525334 IL23AQ9NPF7 189 aa21.13■□□□□ 0.97
TSPAN4-215ENST00000525334 H3BRB1 525 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 DEXIO95424 95 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 CEP55Q53EZ4 464 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 TMEM240Q5SV17 173 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 Q7L0L9 218 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 TRIM50Q86XT4 487 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 RASGRP4Q8TDF6 673 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 SCLYQ96I15 445 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 SLKQ9H2G2 1235 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 TUT1Q9H6E5 874 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 SH3GLB2Q9NR46 395 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 KCNH7Q9NS40 1196 aa21.12■□□□□ 0.97
TSPAN4-215ENST00000525334 PFKFB2O60825 505 aa21.11■□□□□ 0.97
TSPAN4-215ENST00000525334 UTP14CQ5TAP6 766 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-215ENST00000525334 MCTP2Q6DN12 878 aa21.11■□□□□ 0.97
TSPAN4-215ENST00000525334 PSRC1Q6PGN9 363 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-215ENST00000525334 BICD2Q8TD16 824 aa21.11■□□□□ 0.97
TSPAN4-215ENST00000525334 CRYGNQ8WXF5 182 aa21.11■□□□□ 0.97
TSPAN4-215ENST00000525334 MTMR10Q9NXD2 777 aa21.11■□□□□ 0.97
TSPAN4-215ENST00000525334 TANC1Q9C0D5 1861 aa21.11■□□□□ 0.97
TSPAN4-215ENST00000525334 MEIS1O00470 390 aa21.1■□□□□ 0.97
TSPAN4-215ENST00000525334 PITPNM1O00562 1244 aa21.1■□□□□ 0.97
TSPAN4-215ENST00000525334 ARP10275 920 aa21.1■□□□□ 0.97
TSPAN4-215ENST00000525334 TCF7P36402 384 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-215ENST00000525334 ZNF76P36508 570 aa21.1■□□□□ 0.97
TSPAN4-215ENST00000525334 SMAD3P84022 425 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-215ENST00000525334 HIC1Q14526 733 aa21.1■□□□□ 0.97
TSPAN4-215ENST00000525334 ZNF365Q70YC5 407 aa21.1■□□□□ 0.97
TSPAN4-215ENST00000525334 DHX38Q92620 1227 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-215ENST00000525334 FAM86B1E9PN63 330 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 CDKL5O76039 1030 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 CYP3A4P08684 503 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 FAM86B2P0C5J1 330 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 NEK4P51957 841 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 NLRP5P59047 1200 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 ZNF200P98182 395 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 BFSP2Q13515 415 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 RETREG2Q8NC44 543 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 VWCEQ96DN2 955 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 AIFM3Q96NN9 605 aa21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 AGO4Q9HCK5 861 aaKnown RBP21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 JPH1Q9HDC5 661 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 ZNF215Q9UL58 517 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-215ENST00000525334 GSTTP1A0A1W2PQM5 241 aa21.08■□□□□ 0.97
TSPAN4-215ENST00000525334 SMIM10L2AP0DMW4 78 aa21.08■□□□□ 0.97
TSPAN4-215ENST00000525334 SMIM10L2BP0DMW5 78 aa21.08■□□□□ 0.97
TSPAN4-215ENST00000525334 NIPA1Q7RTP0 329 aa21.08■□□□□ 0.97
TSPAN4-215ENST00000525334 CCDC155Q8N6L0 562 aa21.08■□□□□ 0.97
TSPAN4-215ENST00000525334 CAGE1Q8TC20 777 aa21.08■□□□□ 0.97
TSPAN4-215ENST00000525334 SEPT1Q8WYJ6 367 aa21.08■□□□□ 0.97
TSPAN4-215ENST00000525334 SCN5AQ14524 2016 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 NFASCO94856 1347 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 STK36Q9NRP7 1315 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 IGLV3-22A0A075B6J6 115 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 C17orf102A2RUQ5 167 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 DTNBO60941 627 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 LARGE1O95461 756 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 CTDNEP1O95476 244 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 IQCF3P0C7M6 154 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 HOXC8P31273 242 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 RBL2Q08999 1139 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms