RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 RAB11FIP4Q86YS3 637 aa14.01□□□□□ -0.17
CHKA-203ENST00000525155 TRIM22Q8IYM9 498 aa14.01□□□□□ -0.17
CHKA-203ENST00000525155 OSBPL7Q9BZF2 842 aa14.01□□□□□ -0.17
CHKA-203ENST00000525155 SLC28A3Q9HAS3 691 aa14.01□□□□□ -0.17
CHKA-203ENST00000525155 MAP3K20Q9NYL2 800 aaKnown RBP14.01□□□□□ -0.17
CHKA-203ENST00000525155 TPCN1Q9ULQ1 816 aa14.01□□□□□ -0.17
CHKA-203ENST00000525155 PCDHA11Q9Y5I1 949 aa14.01□□□□□ -0.17
CHKA-203ENST00000525155 ZBBXA8MT70 800 aa14□□□□□ -0.17
CHKA-203ENST00000525155 B4DLN1 442 aa14□□□□□ -0.17
CHKA-203ENST00000525155 NBNO60934 754 aa14□□□□□ -0.17
CHKA-203ENST00000525155 IGFBP4P22692 258 aa14□□□□□ -0.17
CHKA-203ENST00000525155 CDC27P30260 824 aa14□□□□□ -0.17
CHKA-203ENST00000525155 PSEN2P49810 448 aa14□□□□□ -0.17
CHKA-203ENST00000525155 MRPL12P52815 198 aaKnown RBP14□□□□□ -0.17
CHKA-203ENST00000525155 CCT2P78371 535 aaKnown RBP14□□□□□ -0.17
CHKA-203ENST00000525155 MBTPS1Q14703 1052 aa14□□□□□ -0.17
CHKA-203ENST00000525155 HSDL1Q3SXM5 330 aa14□□□□□ -0.17
CHKA-203ENST00000525155 BRDTQ58F21 947 aaPredicted RBP14□□□□□ -0.17
CHKA-203ENST00000525155 KRT40Q6A162 431 aa14□□□□□ -0.17
CHKA-203ENST00000525155 MPHOSPH6Q99547 160 aaKnown RBP14□□□□□ -0.17
CHKA-203ENST00000525155 RNF26Q9BY78 433 aaPredicted RBP14□□□□□ -0.17
CHKA-203ENST00000525155 CERS4Q9HA82 394 aa14□□□□□ -0.17
CHKA-203ENST00000525155 FAM217BQ9NTX9 383 aaPredicted RBP14□□□□□ -0.17
CHKA-203ENST00000525155 TET1Q8NFU7 2136 aa14□□□□□ -0.17
CHKA-203ENST00000525155 PRPF3O43395 683 aaKnown RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 F2P00734 622 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 CA3P07451 260 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 PFKMP08237 780 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 ZNF286BP0CG31 522 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 MYCLP12524 364 aaPredicted RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 MRPS9P82933 396 aaKnown RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 TAP1Q03518 808 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 SSRP1Q08945 709 aaKnown RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 RBL2Q08999 1139 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 FUT2Q10981 343 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 STK3Q13188 491 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 SEMA3FQ13275 785 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 LAMC2Q13753 1193 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 PGM5Q15124 567 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 DGKDQ16760 1214 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 CELF3Q5SZQ8 465 aaKnown RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 FAM177A1Q8N128 213 aaPredicted RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 CCDC82Q8N4S0 544 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 PPTC7Q8NI37 304 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 CCDC12Q8WUD4 166 aaPredicted RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 GAS2L1Q99501 681 aaPredicted RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 C16orf70Q9BSU1 422 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 GLT8D2Q9H1C3 349 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 MTIF3Q9H2K0 278 aaKnown RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 GTF2IRD1Q9UHL9 959 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 MRVI1Q9Y6F6 885 aa13.99□□□□□ -0.17
CHKA-203ENST00000525155 V9GY48 417 aaPredicted RBP13.99□□□□□ -0.17
CHKA-203ENST00000525155 TRANK1O15050 2925 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 CNTNAP5Q8WYK1 1306 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 LCHNA4D1U4 455 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 CXCL10P02778 98 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 CKBP12277 381 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 RFC2P35250 354 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 TJAP1Q5JTD0 557 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 PPP2R2DQ66LE6 453 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 PPP1R18Q6NYC8 613 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 HERC6Q8IVU3 1022 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 CMTR1Q8N1G2 835 aaKnown RBP13.98□□□□□ -0.17
CHKA-203ENST00000525155 RETREG2Q8NC44 543 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 PHOSPHO2Q8TCD6 241 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 WASF1Q92558 559 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 GTF3C6Q969F1 213 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 ALG1Q9BT22 464 aa13.98□□□□□ -0.17
CHKA-203ENST00000525155 LPXNO60711 386 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 PPFIA4O75335 1185 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 POU3F3P20264 500 aaPredicted RBP13.97□□□□□ -0.17
CHKA-203ENST00000525155 UBA1P22314 1058 aaKnown RBP13.97□□□□□ -0.17
CHKA-203ENST00000525155 DEFB103AP81534 67 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 SCRN1Q12765 414 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
CHKA-203ENST00000525155 BFSP2Q13515 415 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 MFSD10Q14728 455 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 NTRK3Q16288 839 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 ME3Q16798 604 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 PFKFB3Q16875 520 aaPredicted RBP13.97□□□□□ -0.17
CHKA-203ENST00000525155 KIAA0753Q2KHM9 967 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 FCHSD1Q86WN1 690 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 DHX37Q8IY37 1157 aaKnown RBP13.97□□□□□ -0.17
CHKA-203ENST00000525155 PIBF1Q8WXW3 757 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 ASB2Q96Q27 587 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
CHKA-203ENST00000525155 LLPHQ9BRT6 129 aaKnown RBP13.97□□□□□ -0.17
CHKA-203ENST00000525155 SLC26A6Q9BXS9 759 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 FTOQ9C0B1 505 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHKA-203ENST00000525155 NCOA5Q9HCD5 579 aaKnown RBP13.97□□□□□ -0.17
CHKA-203ENST00000525155 MTCH2Q9Y6C9 303 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 SCN5AQ14524 2016 aa13.97□□□□□ -0.17
CHKA-203ENST00000525155 BAZ2BQ9UIF8 2168 aaKnown RBP13.96□□□□□ -0.17
CHKA-203ENST00000525155 GCOM1H8Y6P7 765 aaPredicted RBP13.96□□□□□ -0.17
CHKA-203ENST00000525155 DEXIO95424 95 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 GGPS1O95749 300 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 POLR2MP0CAP2 368 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 SCG2P13521 617 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 SELPP16109 830 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 XBP1P17861 261 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms