RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 GPATCH4Q5T3I0 446 aaKnown RBP9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 ANKRD45Q5TZF3 282 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 TTBK2Q6IQ55 1244 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 USP38Q8NB14 1042 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 CLEC4DQ8WXI8 215 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 VWCEQ96DN2 955 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 KLF16Q9BXK1 252 aaPredicted RBP9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 WDR11Q9BZH6 1224 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 PRDM6Q9NQX0 595 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 CXXC1Q9P0U4 656 aaPredicted RBP9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 PCDHA11Q9Y5I1 949 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 TCF20Q9UGU0 1960 aaKnown RBP9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 MICAL3Q7RTP6 2002 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 CCDC171Q6TFL3 1326 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 FAM181BA6NEQ2 426 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 A6NJR5 290 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 TIMP2P16035 220 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 POU3F3P20264 500 aaPredicted RBP9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 SLC16A2P36021 539 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 SNAP25P60880 206 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 CCDC178Q5BJE1 867 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 TMEM63BQ5T3F8 832 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 NFRKBQ6P4R8 1299 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 RNF207Q6ZRF8 634 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 EEPD1Q7L9B9 569 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 DGKHQ86XP1 1220 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 SCFD2Q8WU76 684 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 FAM227BQ96M60 508 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 PURBQ96QR8 312 aaKnown RBP9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 MTG1Q9BT17 334 aaPredicted RBP9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 TRPV6Q9H1D0 765 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 OSBPL3Q9H4L5 887 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 RNF41Q9H4P4 317 aaPredicted RBP9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 PRDM12Q9H4Q4 367 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 SLC28A3Q9HAS3 691 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 NLRC5Q86WI3 1866 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 TNKSO95271 1327 aa9.81□□□□□ -0.84
DEPDC1-205ENST00000525124 KAT6AQ92794 2004 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 PTPDC1A2A3K4 754 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 CCL23P55773 120 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 PSMC6P62333 389 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 RPS6P62753 249 aaKnown RBP9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 ADGRE1Q14246 886 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 PPP2R5BQ15173 497 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 MRPL14Q6P1L8 145 aaKnown RBP9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 SLC30A10Q6XR72 485 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 MFSD6Q6ZSS7 791 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 OTOP2Q7RTS6 562 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 ZNF589Q86UQ0 364 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 OR6J1Q8NGC5 347 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 PHOSPHO2Q8TCD6 241 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 ANKS1AQ92625 1134 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 ESR2Q92731 530 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 SLC9A7Q96T83 725 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 NKX2-4Q9H2Z4 354 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 THEGQ9P2T0 379 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 YBX2Q9Y2T7 364 aaKnown RBP9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 SLC4A7Q9Y6M7 1214 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 DDX49Q9Y6V7 483 aaKnown RBP9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 XIRP2A4UGR9 3374 aa9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 FRMPD2Q68DX3 1309 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1-205ENST00000525124 RALGAPA2Q2PPJ7 1873 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 DOCK5Q9H7D0 1870 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 ACTN1P12814 892 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 PTGS1P23219 599 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 PDE4DQ08499 809 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 RBL2Q08999 1139 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 NMIQ13287 307 aaPredicted RBP9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 TTLL4Q14679 1199 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 AMHR2Q16671 573 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 RRP12Q5JTH9 1297 aaKnown RBP9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 CCDC62Q6P9F0 684 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 SESTD1Q86VW0 696 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 SMC5Q8IY18 1101 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 CHMP4CQ96CF2 233 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 SCLYQ96I15 445 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 TOMM22Q9NS69 142 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 TRMT13Q9NUP7 481 aaKnown RBP9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 MTMR7Q9Y216 660 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 ABCB11O95342 1321 aa9.79□□□□□ -0.84
DEPDC1-205ENST00000525124 SOBPA7XYQ1 873 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 PARNO95453 639 aaKnown RBP9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 MYL3P08590 195 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 IQCF3P0C7M6 154 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 ATP2A2P16615 1042 aaKnown RBP9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 SDSP20132 328 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 CALML3P27482 149 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 WDR4P57081 412 aaKnown RBP9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 MRPS5P82675 430 aaKnown RBP9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 GHRHRQ02643 423 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 BFSP2Q13515 415 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 NBPF20Q3BBV1 942 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 ASPRV1Q53RT3 343 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 PPP2R2DQ66LE6 453 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 LYPD8Q6UX82 237 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 IQCA1Q86XH1 822 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 SAMD3Q8N6K7 520 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 CAGE1Q8TC20 777 aa9.78□□□□□ -0.84
DEPDC1-205ENST00000525124 ASB2Q96Q27 587 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms