RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 SLC5A5Q92911 643 aa17.71■□□□□ 0.43
RB1-205ENST00000525036 ZNF577Q9BSK1 485 aa17.71■□□□□ 0.43
RB1-205ENST00000525036 BRD1O95696 1058 aa17.7■□□□□ 0.42
RB1-205ENST00000525036 CCNE2O96020 404 aa17.7■□□□□ 0.42
RB1-205ENST00000525036 C6orf222P0C671 652 aaPredicted RBP17.7■□□□□ 0.42
RB1-205ENST00000525036 SOX10P56693 466 aa17.7■□□□□ 0.42
RB1-205ENST00000525036 HSDL1Q3SXM5 330 aa17.7■□□□□ 0.42
RB1-205ENST00000525036 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
RB1-205ENST00000525036 CCSAPQ6IQ19 270 aaPredicted RBP17.7■□□□□ 0.42
RB1-205ENST00000525036 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
RB1-205ENST00000525036 KLHDC9Q8NEP7 349 aa17.7■□□□□ 0.42
RB1-205ENST00000525036 SENP7Q9BQF6 1050 aa17.7■□□□□ 0.42
RB1-205ENST00000525036 AP5M1Q9H0R1 490 aa17.7■□□□□ 0.42
RB1-205ENST00000525036 KCNMB3Q9NPA1 279 aa17.7■□□□□ 0.42
RB1-205ENST00000525036 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
RB1-205ENST00000525036 MAFGO15525 162 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 MSCO60682 206 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 F13A1P00488 732 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 SETQ01105 290 aaPredicted RBP17.69■□□□□ 0.42
RB1-205ENST00000525036 FSCN1Q16658 493 aaKnown RBP17.69■□□□□ 0.42
RB1-205ENST00000525036 BRAPQ7Z569 592 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 DIS3LQ8TF46 1054 aaKnown RBP17.69■□□□□ 0.42
RB1-205ENST00000525036 CDHR1Q96JP9 859 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 SPATA33Q96N06 139 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 MLXIPQ9HAP2 919 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 DAXXQ9UER7 740 aaPredicted RBP17.69■□□□□ 0.42
RB1-205ENST00000525036 NOL7Q9UMY1 257 aaKnown RBP17.69■□□□□ 0.42
RB1-205ENST00000525036 Q9Y3F1 56 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 DOCK5Q9H7D0 1870 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 PSMD10O75832 226 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 GCFC2P16383 781 aaKnown RBP17.69■□□□□ 0.42
RB1-205ENST00000525036 TRAPPC10P48553 1259 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 NKX3-2P78367 333 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 LAMC2Q13753 1193 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 NEDD9Q14511 834 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 KCNA10Q16322 511 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 METTL7BQ6UX53 244 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 PPP1R13LQ8WUF5 828 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 MTMR9Q96QG7 549 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.69■□□□□ 0.42
RB1-205ENST00000525036 CLIC4Q9Y696 253 aa17.69■□□□□ 0.42
RB1-205ENST00000525036 GSTTP1A0A1W2PQM5 241 aa17.68■□□□□ 0.42
RB1-205ENST00000525036 A6NJR5 290 aa17.68■□□□□ 0.42
RB1-205ENST00000525036 NEMFO60524 1076 aa17.68■□□□□ 0.42
RB1-205ENST00000525036 RILPL1Q5EBL4 403 aa17.68■□□□□ 0.42
RB1-205ENST00000525036 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
RB1-205ENST00000525036 EMID1Q96A84 441 aaPredicted RBP17.68■□□□□ 0.42
RB1-205ENST00000525036 GPR20Q99678 358 aa17.68■□□□□ 0.42
RB1-205ENST00000525036 NAP1L4Q99733 375 aaKnown RBP17.68■□□□□ 0.42
RB1-205ENST00000525036 FRMPD3Q5JV73 1810 aa17.68■□□□□ 0.42
RB1-205ENST00000525036 NFASCO94856 1347 aa17.68■□□□□ 0.42
RB1-205ENST00000525036 MMP3P08254 477 aa17.67■□□□□ 0.42
RB1-205ENST00000525036 CEBPZQ03701 1054 aaKnown RBP17.67■□□□□ 0.42
RB1-205ENST00000525036 IL17AQ16552 155 aa17.67■□□□□ 0.42
RB1-205ENST00000525036 CALCRLQ16602 461 aa17.67■□□□□ 0.42
RB1-205ENST00000525036 SDF4Q9BRK5 362 aa17.67■□□□□ 0.42
RB1-205ENST00000525036 UNC45AQ9H3U1 944 aa17.67■□□□□ 0.42
RB1-205ENST00000525036 JPH1Q9HDC5 661 aaPredicted RBP17.67■□□□□ 0.42
RB1-205ENST00000525036 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
RB1-205ENST00000525036 SLC9A2Q9UBY0 812 aa17.67■□□□□ 0.42
RB1-205ENST00000525036 VAV3Q9UKW4 847 aa17.67■□□□□ 0.42
RB1-205ENST00000525036 CHMP2AO43633 222 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 MYL3P08590 195 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 TXKP42681 527 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 ACTR2P61160 394 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 PTGDRQ13258 359 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 LRCH2Q5VUJ6 765 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 B3GNT9Q6UX72 402 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 CXCL17Q6UXB2 119 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 ARRDC4Q8NCT1 418 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 PPTC7Q8NI37 304 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 FERMT2Q96AC1 680 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 IPO9Q96P70 1041 aaKnown RBP17.66■□□□□ 0.42
RB1-205ENST00000525036 USP28Q96RU2 1077 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 PCYT2Q99447 389 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 RIT2Q99578 217 aa17.66■□□□□ 0.42
RB1-205ENST00000525036 ZSCAN16Q9H4T2 348 aaPredicted RBP17.66■□□□□ 0.42
RB1-205ENST00000525036 EML1O00423 815 aa17.65■□□□□ 0.42
RB1-205ENST00000525036 GAS7O60861 476 aa17.65■□□□□ 0.42
RB1-205ENST00000525036 ASGR1P07306 291 aa17.65■□□□□ 0.42
RB1-205ENST00000525036 ZNF286BP0CG31 522 aa17.65■□□□□ 0.42
RB1-205ENST00000525036 CST5P28325 142 aaPredicted RBP17.65■□□□□ 0.42
RB1-205ENST00000525036 SF3A1Q15459 793 aaKnown RBP17.65■□□□□ 0.42
RB1-205ENST00000525036 RNF180Q86T96 592 aa17.65■□□□□ 0.42
RB1-205ENST00000525036 GIMAP8Q8ND71 665 aaPredicted RBP17.65■□□□□ 0.42
RB1-205ENST00000525036 FAM20AQ96MK3 541 aa17.65■□□□□ 0.42
RB1-205ENST00000525036 TBC1D22BQ9NU19 505 aa17.65■□□□□ 0.42
RB1-205ENST00000525036 KIAA0100Q14667 2235 aaKnown RBP17.64■□□□□ 0.42
RB1-205ENST00000525036 DNM1LO00429 736 aa17.64■□□□□ 0.41
RB1-205ENST00000525036 TBX3O15119 743 aa17.64■□□□□ 0.41
RB1-205ENST00000525036 MARCH6O60337 910 aa17.64■□□□□ 0.41
RB1-205ENST00000525036 HOXD8P13378 290 aaPredicted RBP17.64■□□□□ 0.41
RB1-205ENST00000525036 CPT1AP50416 773 aa17.64■□□□□ 0.41
RB1-205ENST00000525036 ACLYP53396 1101 aa17.64■□□□□ 0.41
RB1-205ENST00000525036 PSMC6P62333 389 aa17.64■□□□□ 0.41
RB1-205ENST00000525036 SPIRE1Q08AE8 756 aa17.64■□□□□ 0.41
RB1-205ENST00000525036 PTPAQ15257 358 aa17.64■□□□□ 0.41
RB1-205ENST00000525036 UTP14CQ5TAP6 766 aaKnown RBP17.64■□□□□ 0.41
RB1-205ENST00000525036 TRIM50Q86XT4 487 aa17.64■□□□□ 0.41
RB1-205ENST00000525036 KAT2BQ92831 832 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms