RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MAP4K2Q12851 820 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 LSAMPQ13449 338 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 NTRK3Q16288 839 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 STEAP3Q658P3 488 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 CELF2-AS1Q8N7Q2 184 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 DTX3Q8N9I9 347 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 TTLL11Q8NHH1 800 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 IGDCC4Q8TDY8 1250 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 CLEC4DQ8WXI8 215 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 TRMT2BQ96GJ1 504 aaKnown RBP2.91□□□□□ -1.94
CD44-212ENST00000524922 TOE1Q96GM8 510 aaKnown RBP2.91□□□□□ -1.94
CD44-212ENST00000524922 LCORQ96JN0 433 aaPredicted RBP2.91□□□□□ -1.94
CD44-212ENST00000524922 CCDC140Q96MF4 163 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 ZSWIM3Q96MP5 696 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 GPR20Q99678 358 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 TINF2Q9BSI4 451 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 NGRNQ9NPE2 291 aaKnown RBP2.91□□□□□ -1.94
CD44-212ENST00000524922 ASH2LQ9UBL3 628 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 ST6GALNAC2Q9UJ37 374 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 TSC22D4Q9Y3Q8 395 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 TELO2Q9Y4R8 837 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 PCDHA2Q9Y5H9 948 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 URB2Q14146 1524 aaKnown RBP2.91□□□□□ -1.94
CD44-212ENST00000524922 MAGI1Q96QZ7 1491 aaPredicted RBP2.9□□□□□ -1.94
CD44-212ENST00000524922 GJB6O95452 261 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 PPP2R2AP63151 447 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 NKX3-2P78367 333 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 TNNI3KQ59H18 835 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 CRIP3Q6Q6R5 217 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 SPRED1Q7Z699 444 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 MCF2L2Q86YR7 1114 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 NUDT10Q8NFP7 164 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 DVL3Q92997 716 aaPredicted RBP2.9□□□□□ -1.95
CD44-212ENST00000524922 NUDT11Q96G61 164 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 SCAND2PQ9GZW5 306 aaPredicted RBP2.9□□□□□ -1.95
CD44-212ENST00000524922 SMOC1Q9H4F8 434 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 CCSER2Q9H7U1 834 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 ZNF408Q9H9D4 720 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 GPR27Q9NS67 375 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 MYOTQ9UBF9 498 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 ADAM29Q9UKF5 820 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 PCDHB4Q9Y5E5 795 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 ERCC6L2Q5T890 1561 aa2.9□□□□□ -1.95
CD44-212ENST00000524922 SYNJ1O43426 1573 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 KLF4O43474 513 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 CNOT4O95628 575 aaKnown RBP2.89□□□□□ -1.95
CD44-212ENST00000524922 KNG1P01042 644 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 SLPIP03973 132 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 ACVRL1P37023 503 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 SV2CQ496J9 727 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 LARP1BQ659C4 914 aaKnown RBP2.89□□□□□ -1.95
CD44-212ENST00000524922 CYP4F22Q6NT55 531 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 BORAQ6PGQ7 559 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 RBM12BQ8IXT5 1001 aaKnown RBP2.89□□□□□ -1.95
CD44-212ENST00000524922 SLC16A11Q8NCK7 471 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 PIP4K2CQ8TBX8 421 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 PHOSPHO1Q8TCT1 267 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 OSBP2Q969R2 916 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 PPP1R14AQ96A00 147 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 LOXL4Q96JB6 756 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 TMEM209Q96SK2 561 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 JAM3Q9BX67 310 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 EPN3Q9H201 632 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 EPB41L1Q9H4G0 881 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 SLC6A20Q9NP91 592 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 ARHGEF4Q9NR80 690 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 CLDND1Q9NY35 253 aa2.89□□□□□ -1.95
CD44-212ENST00000524922 EIF4G3O43432 1585 aaKnown RBP2.88□□□□□ -1.95
CD44-212ENST00000524922 ASXL2Q76L83 1435 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 TCRBV5S4A2TA0A5A2 114 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 ACOT7O00154 380 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 MYO1BO43795 1136 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 DGKIO75912 1065 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 DDAH1O94760 285 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 IL18BPO95998 194 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 LTFP02788 710 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 EPHA5P54756 1037 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 PPP2CBP62714 309 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 PPP2CAP67775 309 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 NFATC3Q12968 1075 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 CHRNA2Q15822 529 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 FXNQ16595 210 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 PHF19Q5T6S3 580 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 RSPO2Q6UXX9 243 aaPredicted RBP2.88□□□□□ -1.95
CD44-212ENST00000524922 TMC5Q6UXY8 1006 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 OTOP3Q7RTS5 596 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 KBTBD2Q8IY47 623 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 KLHL36Q8N4N3 616 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 UHMK1Q8TAS1 419 aaKnown RBP2.88□□□□□ -1.95
CD44-212ENST00000524922 GMLQ99445 158 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 IER2Q9BTL4 223 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 ZNF747Q9BV97 191 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 KATNBL1Q9H079 304 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 KLC2Q9H0B6 622 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 TMEM168Q9H0V1 697 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 KCND1Q9NSA2 647 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 COA3Q9Y2R0 106 aaPredicted RBP2.88□□□□□ -1.95
CD44-212ENST00000524922 MAPKBP1O60336 1514 aa2.88□□□□□ -1.95
CD44-212ENST00000524922 DNMBPQ6XZF7 1577 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 MROH2BQ7Z745 1585 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms