RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TRMT2BQ96GJ1 504 aaKnown RBP4.59□□□□□ -1.67
CSDE1-208ENST00000524652 TMEM169Q96HH4 297 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 EPN3Q9H201 632 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 LRP2BPQ9P2M1 347 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 TMEFF2Q9UIK5 374 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-208ENST00000524652 PALD1Q9ULE6 856 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 COA3Q9Y2R0 106 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-208ENST00000524652 CDC42BPBQ9Y5S2 1711 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 MRVI1Q9Y6F6 885 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 MAP3K4Q9Y6R4 1608 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 B2RBV5 119 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 H7BY64 318 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 ERCC5P28715 1186 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-208ENST00000524652 LTBRP36941 435 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 BCL6P41182 706 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 ECI1P42126 302 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 GFRA1P56159 465 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 KIAA2012Q0VF49 1180 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 ZNF827Q17R98 1081 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 RGL3Q3MIN7 710 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 PRR31Q5SQ13 230 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 PPIL6Q8IXY8 311 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 FAM26EQ8N5C1 309 aa4.58□□□□□ -1.68
CSDE1-208ENST00000524652 ABCA9Q8IUA7 1624 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 ASXL2Q76L83 1435 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 ARNTLO00327 626 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 DDAH1O94760 285 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 ITGB3P05106 788 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 NKX3-2P78367 333 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 PRSS53Q2L4Q9 553 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 ZXDCQ2QGD7 858 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-208ENST00000524652 CR1LQ2VPA4 569 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 EMC4Q5J8M3 183 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 MRM1Q6IN84 353 aaKnown RBP4.57□□□□□ -1.68
CSDE1-208ENST00000524652 BORAQ6PGQ7 559 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 EEPD1Q7L9B9 569 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 GGNQ86UU5 652 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 FAM124AQ86V42 546 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 RCBTB1Q8NDN9 531 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 DDX1Q92499 740 aaKnown RBP4.57□□□□□ -1.68
CSDE1-208ENST00000524652 C1orf159Q96HA4 380 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 RBM15Q96T37 977 aaKnown RBP eCLIP4.57□□□□□ -1.683e-7■■■■□ 23.4
CSDE1-208ENST00000524652 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.57□□□□□ -1.68
CSDE1-208ENST00000524652 YIPF4Q9BSR8 244 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 MYO5CQ9NQX4 1742 aa4.57□□□□□ -1.68
CSDE1-208ENST00000524652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.56□□□□□ -1.68
CSDE1-208ENST00000524652 CCDC18Q5T9S5 1454 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 WDR7Q9Y4E6 1490 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 MROH6A6NGR9 719 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 C9orf118A6NHY6 69 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 AGRPO00253 132 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 HGSO14964 777 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-208ENST00000524652 PLATP00750 562 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 CAPNS1P04632 268 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 FGRP09769 529 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 MAGEA10P43363 369 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-208ENST00000524652 KCNJ6P48051 423 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 ADAM9Q13443 819 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 LSAMPQ13449 338 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 SF1Q15637 639 aaKnown RBP4.56□□□□□ -1.68
CSDE1-208ENST00000524652 LGI4Q8N135 537 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 TTC9BQ8N6N2 239 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 TMEM145Q8NBT3 493 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 SYT3Q9BQG1 590 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 ZNF408Q9H9D4 720 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 DTLQ9NZJ0 730 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 FBXL7Q9UJT9 491 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 NPFFR2Q9Y5X5 522 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 GLI2P10070 1586 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 ABCC10Q5T3U5 1492 aa4.56□□□□□ -1.68
CSDE1-208ENST00000524652 SUPT6HQ7KZ85 1726 aaKnown RBP4.55□□□□□ -1.68
CSDE1-208ENST00000524652 PREX2Q70Z35 1606 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 MAFKO60675 156 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 CYP7B1O75881 506 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 DGKIO75912 1065 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 TCF3P15923 654 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 ZNF28P17035 718 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 ETFBP38117 255 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 STAT5AP42229 794 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 MAP4K2Q12851 820 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 SLC10A6Q3KNW5 377 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 SLC35F1Q5T1Q4 408 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 STEAP3Q658P3 488 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 PHOSPHO1Q8TCT1 267 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 MICAL1Q8TDZ2 1067 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 TOE1Q96GM8 510 aaKnown RBP4.55□□□□□ -1.68
CSDE1-208ENST00000524652 WRNIP1Q96S55 665 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 EPB41L1Q9H4G0 881 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 SMPD4Q9NXE4 827 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 MYRFQ9Y2G1 1151 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 PCDHB4Q9Y5E5 795 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 PCDHA2Q9Y5H9 948 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 MAP3K1Q13233 1512 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 EHBP1L1Q8N3D4 1523 aa4.55□□□□□ -1.68
CSDE1-208ENST00000524652 TCRBV5S2A0A599 114 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 TADA3O75528 432 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 GJB6O95452 261 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 LCP1P13796 627 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 ADAM17P78536 824 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 SURF1Q15526 300 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms