RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 UBA1P22314 1058 aaKnown RBP18.9■□□□□ 0.62
CSGALNACT1-216ENST00000524213 ITGB8P26012 769 aa18.9■□□□□ 0.62
CSGALNACT1-216ENST00000524213 FXR1P51114 621 aaKnown RBP eCLIP18.9■□□□□ 0.62
CSGALNACT1-216ENST00000524213 CEP55Q53EZ4 464 aa18.9■□□□□ 0.62
CSGALNACT1-216ENST00000524213 FAM126BQ8IXS8 530 aa18.9■□□□□ 0.62
CSGALNACT1-216ENST00000524213 BADQ92934 168 aa18.9■□□□□ 0.62
CSGALNACT1-216ENST00000524213 TMEM39AQ9NV64 488 aa18.9■□□□□ 0.62
CSGALNACT1-216ENST00000524213 M0R2N6 131 aa18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 CD2BP2O95400 341 aaKnown RBP18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 KRT2P35908 639 aa18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 USP11P51784 963 aa18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SEMA3FQ13275 785 aa18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 NONOQ15233 471 aaKnown RBP eCLIP18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 NPY5RQ15761 445 aa18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 MYSM1Q5VVJ2 828 aa18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 PPTC7Q8NI37 304 aa18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 AFG1LQ8WV93 481 aa18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 CRYGNQ8WXF5 182 aa18.89■□□□□ 0.61
CSGALNACT1-216ENST00000524213 CCDC194A0A1B0GVG4 234 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 ADAMTS3O15072 1205 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 DTNBO60941 627 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 MMP3P08254 477 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 CIITAP33076 1130 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SETQ01105 290 aaPredicted RBP18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SP2Q02086 613 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SAFBQ15424 915 aaKnown RBP eCLIP18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 DGKDQ16760 1214 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 METTL7BQ6UX53 244 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 TBCKQ8TEA7 893 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 C8orf76Q96K31 380 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SPATA33Q96N06 139 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 MTG1Q9BT17 334 aaPredicted RBP18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 TBX21Q9UL17 535 aa18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.88■□□□□ 0.61
CSGALNACT1-216ENST00000524213 MEIS1O00470 390 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 TLR3O15455 904 aaKnown RBP18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SORBS3O60504 671 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 CD4P01730 458 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 MMP1P03956 469 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 RAG1P15918 1043 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 KRT40Q6A162 431 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 PLA2G4DQ86XP0 818 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 TDHQ8IZJ6 230 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 PPP1R13LQ8WUF5 828 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 KCNH7Q9NS40 1196 aa18.87■□□□□ 0.61
CSGALNACT1-216ENST00000524213 NFASCO94856 1347 aa18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 NOP56O00567 594 aaKnown RBP18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 PPFIA4O75335 1185 aa18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 KCNA2P16389 499 aa18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 MOXD1Q6UVY6 613 aa18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 CYFIP1Q7L576 1253 aa18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 NAP1L4Q99733 375 aaKnown RBP18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SDF4Q9BRK5 362 aa18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 TRPV6Q9H1D0 765 aa18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 GJB4Q9NTQ9 266 aa18.86■□□□□ 0.61
CSGALNACT1-216ENST00000524213 FAM86B1E9PN63 330 aa18.85■□□□□ 0.61
CSGALNACT1-216ENST00000524213 B4GALT4O60513 344 aa18.85■□□□□ 0.61
CSGALNACT1-216ENST00000524213 FAM86B2P0C5J1 330 aa18.85■□□□□ 0.61
CSGALNACT1-216ENST00000524213 NBPF20Q3BBV1 942 aa18.85■□□□□ 0.61
CSGALNACT1-216ENST00000524213 HSDL1Q3SXM5 330 aa18.85■□□□□ 0.61
CSGALNACT1-216ENST00000524213 KATNAL1Q9BW62 490 aa18.85■□□□□ 0.61
CSGALNACT1-216ENST00000524213 BCAS3Q9H6U6 928 aa18.85■□□□□ 0.61
CSGALNACT1-216ENST00000524213 LAMA3Q16787 3333 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 IGLV3-22A0A075B6J6 115 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SOX1O00570 391 aaPredicted RBP18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 ATP9AO75110 1047 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 TIMP1P01033 207 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 ARP10275 920 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 HOXD8P13378 290 aaPredicted RBP18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 FOSBP53539 338 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 FAM47CQ5HY64 1035 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 NEK8Q86SG6 692 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 DIS3L2Q8IYB7 885 aaKnown RBP18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 CYP2W1Q8TAV3 490 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 AGO4Q9HCK5 861 aaKnown RBP18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SMC3Q9UQE7 1217 aa18.84■□□□□ 0.61
CSGALNACT1-216ENST00000524213 SLC34A2O95436 690 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 GCFC2P16383 781 aaKnown RBP18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 CHMP4BP1P59074 171 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 CUL4AQ13619 759 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 INF2Q27J81 1249 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 PRR16Q569H4 304 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 PIK3AP1Q6ZUJ8 805 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 FBXO18Q8NFZ0 1043 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 OXER1Q8TDS5 423 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 SEPT1Q8WYJ6 367 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 KAT2BQ92831 832 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 SNX21Q969T3 373 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 GPR20Q99678 358 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 PPP1R12CQ9BZL4 782 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 TBC1D22BQ9NU19 505 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 PKD2L1Q9P0L9 805 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 SLC9A2Q9UBY0 812 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 TCEAL9Q9UHQ7 104 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 SZT2Q5T011 3432 aa18.83■□□□□ 0.6
CSGALNACT1-216ENST00000524213 TRIP12Q14669 1992 aaPredicted RBP18.82■□□□□ 0.6
CSGALNACT1-216ENST00000524213 CYP3A7-CYP3A51PA0A087WV96 503 aa18.82■□□□□ 0.6
CSGALNACT1-216ENST00000524213 BTBD18B2RXH4 712 aa18.82■□□□□ 0.6
CSGALNACT1-216ENST00000524213 K7ELQ4 463 aaPredicted RBP18.82■□□□□ 0.6
CSGALNACT1-216ENST00000524213 ZNF286BP0CG31 522 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms