RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 LGR4Q9BXB1 951 aa6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 USP40Q9NVE5 1235 aa6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 TCEAL9Q9UHQ7 104 aa6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 ZBTB7AO95365 584 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 S100BP04271 92 aaPredicted RBP6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 THBDP07204 575 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 CD53P19397 219 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 HSD3B2P26439 372 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 SSR1P43307 286 aaKnown RBP6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 PLP2Q04941 152 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 GTF2IRD2BQ6EKJ0 949 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 CCDC174Q6PII3 467 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 GTF2IRD2Q86UP8 949 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 FERMT3Q86UX7 667 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 ATL2Q8NHH9 583 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 PLEKHO2Q8TD55 490 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 DPF3Q92784 378 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 DDX11Q96FC9 970 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 MMP19Q99542 508 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 APBA2Q99767 749 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 TGIF2Q9GZN2 237 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 IFT122Q9HBG6 1241 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 PCDH12Q9NPG4 1184 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 SPATA6Q9NWH7 488 aaPredicted RBP6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 MARCH2Q9P0N8 246 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 STRIP2Q9ULQ0 834 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 G3BP2Q9UN86 482 aaKnown RBP6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 INPP5FQ9Y2H2 1132 aa6.96□□□□□ -1.3
EFCAB13-213ENST00000523978 C8BP07358 591 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 ZNF143P52747 638 aaPredicted RBP6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 POU5F1BQ06416 359 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 EFEMP1Q12805 493 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 UBXN11Q5T124 520 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 EFCAB2Q5VUJ9 269 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 POMZP3Q6PJE2 187 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 FMNL3Q8IVF7 1028 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 TRIM59Q8IWR1 403 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 CRACR2BQ8N4Y2 399 aaPredicted RBP6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 ZBTB8AQ96BR9 441 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 MRGPRX3Q96LB0 322 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 SYNRGQ9UMZ2 1314 aa6.95□□□□□ -1.3
EFCAB13-213ENST00000523978 NOP56O00567 594 aaKnown RBP6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 NOBOXO60393 691 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 ADRB1P08588 477 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 COL6A1P12109 1028 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 ATP2B1P20020 1258 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 PEX19P40855 299 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 CYP4F3Q08477 520 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 SMAD4Q13485 552 aaKnown RBP6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 DHX8Q14562 1220 aaKnown RBP6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 MAPRE1Q15691 268 aaKnown RBP6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 INF2Q27J81 1249 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 RPAINQ86UA6 219 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 DCP2Q8IU60 420 aaKnown RBP6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 DRC7Q8IY82 874 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 PPP1R14AQ96A00 147 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 IL17RAQ96F46 866 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 CDC5LQ99459 802 aaKnown RBP6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 BTG4Q9NY30 223 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 SFMBT1Q9UHJ3 866 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 ANAPC4Q9UJX5 808 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 DUSP10Q9Y6W6 482 aa6.94□□□□□ -1.3
EFCAB13-213ENST00000523978 TIMM44O43615 452 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 CYP2C8P10632 490 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 NAT2P11245 290 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 NEXNQ0ZGT2 675 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 UBE4AQ14139 1066 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 SAFB2Q14151 953 aaKnown RBP eCLIP6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 NCAPHQ15003 741 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 DBX2Q6ZNG2 339 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 FRS2Q8WU20 508 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 DDX1Q92499 740 aaKnown RBP6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 SYT3Q9BQG1 590 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 GORASP1Q9BQQ3 440 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 PIF1Q9H611 641 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 CCSER2Q9H7U1 834 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 DDX56Q9NY93 547 aaKnown RBP6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 NTMQ9P121 344 aa6.93□□□□□ -1.3
EFCAB13-213ENST00000523978 TBX1O43435 398 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 VIL1P09327 827 aaKnown RBP6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 CNR2P34972 360 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 SARSP49591 514 aaKnown RBP6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 GJA9P57773 515 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 ZKSCAN8Q15776 578 aaPredicted RBP6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 SPATS1Q496A3 300 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 L1TD1Q5T7N2 865 aaKnown RBP6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 GGNQ86UU5 652 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 RPUSD2Q8IZ73 545 aaKnown RBP6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 LINC00482Q8N8I6 264 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 SLC43A3Q8NBI5 491 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 NPLOC4Q8TAT6 608 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 BTN2A2Q8WVV5 523 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 NKX2-4Q9H2Z4 354 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 CASS4Q9NQ75 786 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 CYP26B1Q9NR63 512 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 IFT57Q9NWB7 429 aa6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 PUF60Q9UHX1 559 aaKnown RBP6.92□□□□□ -1.3
EFCAB13-213ENST00000523978 C22orf46C9J442 243 aa6.91□□□□□ -1.3
EFCAB13-213ENST00000523978 SGSM2O43147 1006 aa6.91□□□□□ -1.3
EFCAB13-213ENST00000523978 FGAP02671 866 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms