RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 CTNNB1P35222 781 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 PTK7Q13308 1070 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 ADAM15Q13444 863 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 RNF207Q6ZRF8 634 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 SEPT14Q6ZU15 432 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 C7orf31Q8N865 590 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 TBC1D5Q92609 795 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 SAMD11Q96NU1 681 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 PRRX2Q99811 253 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 FSD1Q9BTV5 496 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 CACNA1HO95180 2353 aa11.43□□□□□ -0.58
LAMA4-220ENST00000523765 FRMPD2Q68DX3 1309 aaPredicted RBP11.42□□□□□ -0.58
LAMA4-220ENST00000523765 GPAA1O43292 621 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 SORBS3O60504 671 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 DNAJB1P25685 340 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 TDO2P48775 406 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 RBM10P98175 930 aaKnown RBP11.42□□□□□ -0.58
LAMA4-220ENST00000523765 MFSD10Q14728 455 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 CBX2Q14781 532 aaPredicted RBP11.42□□□□□ -0.58
LAMA4-220ENST00000523765 KIAA0753Q2KHM9 967 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 CCDC96Q2M329 555 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 GIMAP6Q6P9H5 292 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
LAMA4-220ENST00000523765 KIF1BPQ96EK5 621 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 SEC62Q99442 399 aaKnown RBP11.42□□□□□ -0.58
LAMA4-220ENST00000523765 COL20A1Q9P218 1284 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 STX8Q9UNK0 236 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 PCDHGC5Q9Y5F6 944 aa11.42□□□□□ -0.58
LAMA4-220ENST00000523765 LOC102724159A0A0B4J2E5 919 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 MED19A0JLT2 244 aaPredicted RBP11.41□□□□□ -0.58
LAMA4-220ENST00000523765 RSPH10B2B2RC85 870 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 C5orf67F2Z3F1 127 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 EYA4O95677 639 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 F2P00734 622 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 GH1P01241 217 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 RSPH10BP0C881 870 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 THPOP40225 353 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 SIGLEC14Q08ET2 396 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 PWP2Q15269 919 aaKnown RBP11.41□□□□□ -0.58
LAMA4-220ENST00000523765 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 ERMP1Q7Z2K6 904 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 IFNL3Q8IZI9 196 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 PANK1Q8TE04 598 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 TAAR1Q96RJ0 339 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 GPCPD1Q9NPB8 672 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 DDX19BQ9UMR2 479 aa11.41□□□□□ -0.58
LAMA4-220ENST00000523765 FOXP2O15409 715 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 SMARCA5O60264 1052 aaPredicted RBP11.4□□□□□ -0.58
LAMA4-220ENST00000523765 GLP2RO95838 553 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 APPP05067 770 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 CTSHP09668 335 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 CASTP20810 708 aaKnown RBP11.4□□□□□ -0.58
LAMA4-220ENST00000523765 BMPR1AP36894 532 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 ID4P47928 161 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 CTDSPL2Q05D32 466 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 PKN1Q16512 942 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 TSHZ3Q63HK5 1081 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 BTNL9Q6UXG8 535 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 SERINC5Q86VE9 423 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 RPGRIP1Q96KN7 1286 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 IFIH1Q9BYX4 1025 aaKnown RBP11.4□□□□□ -0.58
LAMA4-220ENST00000523765 CPVLQ9H3G5 476 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 RC3H2Q9HBD1 1191 aaKnown RBP11.4□□□□□ -0.58
LAMA4-220ENST00000523765 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
LAMA4-220ENST00000523765 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.4□□□□□ -0.58
LAMA4-220ENST00000523765 USP15Q9Y4E8 981 aaPredicted RBP11.4□□□□□ -0.58
LAMA4-220ENST00000523765 CFAP47Q6ZTR5 3102 aa11.4□□□□□ -0.58
LAMA4-220ENST00000523765 DOCK5Q9H7D0 1870 aa11.4□□□□□ -0.59
LAMA4-220ENST00000523765 NCK2O43639 380 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 NBL1P41271 181 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 NDUFV1P49821 464 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 PPARAQ07869 468 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 DGKDQ16760 1214 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 HSP90AB4PQ58FF6 505 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 ZSCAN25Q6NSZ9 544 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 FRMD5Q7Z6J6 570 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 FIBCD1Q8N539 461 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 TMEM105Q8N8V8 129 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 DNERQ8NFT8 737 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 APPBP2Q92624 585 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 SMOC2Q9H3U7 446 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 BCAS3Q9H6U6 928 aa11.39□□□□□ -0.59
LAMA4-220ENST00000523765 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
LAMA4-220ENST00000523765 EMSYQ7Z589 1322 aa11.38□□□□□ -0.59
LAMA4-220ENST00000523765 PATL2C9JE40 543 aaKnown RBP11.38□□□□□ -0.59
LAMA4-220ENST00000523765 TREHO43280 583 aa11.38□□□□□ -0.59
LAMA4-220ENST00000523765 KDM4AO75164 1064 aa11.38□□□□□ -0.59
LAMA4-220ENST00000523765 MMP1P03956 469 aa11.38□□□□□ -0.59
LAMA4-220ENST00000523765 NOVP48745 357 aa11.38□□□□□ -0.59
LAMA4-220ENST00000523765 USH1GQ495M9 461 aa11.38□□□□□ -0.59
LAMA4-220ENST00000523765 RBM23Q86U06 439 aaKnown RBP11.38□□□□□ -0.59
LAMA4-220ENST00000523765 VN1R2Q8NFZ6 395 aa11.38□□□□□ -0.59
LAMA4-220ENST00000523765 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
LAMA4-220ENST00000523765 C11orf84Q9BUA3 381 aaPredicted RBP11.38□□□□□ -0.59
LAMA4-220ENST00000523765 LMAN2LQ9H0V9 348 aa11.38□□□□□ -0.59
LAMA4-220ENST00000523765 RIF1Q5UIP0 2472 aaKnown RBP11.37□□□□□ -0.59
LAMA4-220ENST00000523765 PTPRZ1P23471 2315 aaPredicted RBP11.37□□□□□ -0.59
LAMA4-220ENST00000523765 RNF113AO15541 343 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms