RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 RPS6KB1P23443 525 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 SMARCA1P28370 1054 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 CDC27P30260 824 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 GNAQP50148 359 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 WDR5P61964 334 aaKnown RBP17.38■□□□□ 0.37
PCM1-218ENST00000523055 PPP2R5BQ15173 497 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 RTN1Q16799 776 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 TCTN1Q2MV58 587 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 BLOC1S2Q6QNY1 142 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 SCFD2Q8WU76 684 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 GPKOWQ92917 476 aaPredicted RBP eCLIP17.38■□□□□ 0.37
PCM1-218ENST00000523055 BRF1Q92994 677 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 FBXL18Q96ME1 805 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 LZTS2Q9BRK4 669 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 PDCD2LQ9BRP1 358 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 MTG1Q9BT17 334 aaPredicted RBP17.38■□□□□ 0.37
PCM1-218ENST00000523055 FTOQ9C0B1 505 aaKnown RBP eCLIP17.38■□□□□ 0.375e-6■□□□□ 9.9
PCM1-218ENST00000523055 FAM217BQ9NTX9 383 aaPredicted RBP17.38■□□□□ 0.37
PCM1-218ENST00000523055 SEC63Q9UGP8 760 aaKnown RBP17.38■□□□□ 0.37
PCM1-218ENST00000523055 NAP1L2Q9ULW6 460 aaPredicted RBP17.38■□□□□ 0.37
PCM1-218ENST00000523055 GOLGA8AA7E2F4 631 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 GOLGA8BA8MQT2 603 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
PCM1-218ENST00000523055 MYL3P08590 195 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 TXNP10599 105 aaKnown RBP17.38■□□□□ 0.37
PCM1-218ENST00000523055 MYCLP12524 364 aaPredicted RBP17.38■□□□□ 0.37
PCM1-218ENST00000523055 DEFB103AP81534 67 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 PGM5Q15124 567 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 NFRKBQ6P4R8 1299 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 CCDC62Q6P9F0 684 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 SYNE3Q6ZMZ3 975 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 OR6J1Q8NGC5 347 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 IWS1Q96ST2 819 aa17.38■□□□□ 0.37
PCM1-218ENST00000523055 C5orf42Q9H799 3197 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 POTEB3A0JP26 581 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 RGS20O76081 388 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 KCNA5P22460 613 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 ERVK-21P61565 698 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 FGD1P98174 961 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 FUT2Q10981 343 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 STXBP2Q15833 593 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 LY6KQ17RY6 165 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 USP17L6PQ6QN14 398 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 POTEBQ6S5H4 581 aa17.37■□□□□ 0.37
PCM1-218ENST00000523055 GRXCR2A6NFK2 248 aa17.36■□□□□ 0.37
PCM1-218ENST00000523055 B4DLN1 442 aa17.36■□□□□ 0.37
PCM1-218ENST00000523055 CPT1AP50416 773 aa17.36■□□□□ 0.37
PCM1-218ENST00000523055 MRPL12P52815 198 aaKnown RBP17.36■□□□□ 0.37
PCM1-218ENST00000523055 TRAF1Q13077 416 aa17.36■□□□□ 0.37
PCM1-218ENST00000523055 FAM47CQ5HY64 1035 aa17.36■□□□□ 0.37
PCM1-218ENST00000523055 RETREG2Q8NC44 543 aa17.36■□□□□ 0.37
PCM1-218ENST00000523055 RBM28Q9NW13 759 aaKnown RBP17.36■□□□□ 0.37
PCM1-218ENST00000523055 MAP3K20Q9NYL2 800 aaKnown RBP17.36■□□□□ 0.37
PCM1-218ENST00000523055 MYO7AQ13402 2215 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 LINC01553A4QN01 128 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 A6NJR5 290 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 MEIS2O14770 477 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 ALADP13716 330 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 ADD1P35611 737 aaKnown RBP17.35■□□□□ 0.37
PCM1-218ENST00000523055 PTCRAQ6ISU1 281 aaPredicted RBP17.35■□□□□ 0.37
PCM1-218ENST00000523055 TYW1BQ6NUM6 668 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 HEATR3Q7Z4Q2 680 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 DHX38Q92620 1227 aaKnown RBP17.35■□□□□ 0.37
PCM1-218ENST00000523055 UIMC1Q96RL1 719 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 AGXT2Q9BYV1 514 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
PCM1-218ENST00000523055 MTUS1Q9ULD2 1270 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 FRMPD4Q14CM0 1322 aa17.35■□□□□ 0.37
PCM1-218ENST00000523055 EPB41L2O43491 1005 aaKnown RBP17.34■□□□□ 0.37
PCM1-218ENST00000523055 SORBS3O60504 671 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 EIF3JO75822 258 aaKnown RBP17.34■□□□□ 0.37
PCM1-218ENST00000523055 GJB5O95377 273 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 SIP14410 1827 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 PTPN11Q06124 597 aaPredicted RBP17.34■□□□□ 0.37
PCM1-218ENST00000523055 ARHGAP1Q07960 439 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 BFSP2Q13515 415 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 UBE2SQ16763 222 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 WWC2Q6AWC2 1192 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 VSIG10LQ86VR7 867 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 SAMD3Q8N6K7 520 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 NEK9Q8TD19 979 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 CFAP54Q96N23 3096 aa17.34■□□□□ 0.37
PCM1-218ENST00000523055 NKRFO15226 690 aaKnown RBP eCLIP17.33■□□□□ 0.36
PCM1-218ENST00000523055 NBNO60934 754 aa17.33■□□□□ 0.36
PCM1-218ENST00000523055 PPFIA3O75145 1194 aa17.33■□□□□ 0.36
PCM1-218ENST00000523055 CXCL10P02778 98 aa17.33■□□□□ 0.36
PCM1-218ENST00000523055 SSTR3P32745 418 aaPredicted RBP17.33■□□□□ 0.36
PCM1-218ENST00000523055 KCNJ6P48051 423 aa17.33■□□□□ 0.36
PCM1-218ENST00000523055 METAP2P50579 478 aaKnown RBP eCLIP17.33■□□□□ 0.36
PCM1-218ENST00000523055 MRPS9P82933 396 aaKnown RBP17.33■□□□□ 0.36
PCM1-218ENST00000523055 TOB2Q14106 344 aaPredicted RBP17.33■□□□□ 0.36
PCM1-218ENST00000523055 RUFY3Q7L099 469 aa17.33■□□□□ 0.36
PCM1-218ENST00000523055 SMARCC2Q8TAQ2 1214 aa17.33■□□□□ 0.36
PCM1-218ENST00000523055 TGS1Q96RS0 853 aaKnown RBP17.33■□□□□ 0.36
PCM1-218ENST00000523055 LARP6Q9BRS8 491 aaKnown RBP17.33■□□□□ 0.36
PCM1-218ENST00000523055 KCNH6Q9H252 994 aa17.33■□□□□ 0.36
PCM1-218ENST00000523055 ZSWIM6Q9HCJ5 1215 aa17.33■□□□□ 0.36
PCM1-218ENST00000523055 DDX41Q9UJV9 622 aaKnown RBP17.33■□□□□ 0.36
PCM1-218ENST00000523055 MRVI1Q9Y6F6 885 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms