RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 RUFY2Q8WXA3 655 aa10.88□□□□□ -0.67
SDC2-207ENST00000522911 APBB2Q92870 758 aa10.88□□□□□ -0.67
SDC2-207ENST00000522911 ALG1Q9BT22 464 aa10.88□□□□□ -0.67
SDC2-207ENST00000522911 SPZ1Q9BXG8 430 aa10.88□□□□□ -0.67
SDC2-207ENST00000522911 COL4A4P53420 1690 aaPredicted RBP10.88□□□□□ -0.67
SDC2-207ENST00000522911 MYH6P13533 1939 aa10.88□□□□□ -0.67
SDC2-207ENST00000522911 ERICH2A1L162 156 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 C17orf102A2RUQ5 167 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 FIBPO43427 364 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 GPR37L1O60883 481 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 ABCB7O75027 752 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 AMHP03971 560 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 LGALS2P05162 132 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 MYCLP12524 364 aaPredicted RBP10.87□□□□□ -0.67
SDC2-207ENST00000522911 GSPT1P15170 499 aaKnown RBP10.87□□□□□ -0.67
SDC2-207ENST00000522911 HOXA13P31271 388 aaPredicted RBP10.87□□□□□ -0.67
SDC2-207ENST00000522911 ZNF200P98182 395 aaPredicted RBP10.87□□□□□ -0.67
SDC2-207ENST00000522911 FAM26DQ5JW98 314 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 TTC22Q5TAA0 569 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 PCNX4Q63HM2 1172 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 FAM43BQ6ZT52 329 aaPredicted RBP10.87□□□□□ -0.67
SDC2-207ENST00000522911 SPRED2Q7Z698 418 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 DBF4BQ8NFT6 615 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 TOP1MTQ969P6 601 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 PIGSQ96S52 555 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 RNPEPQ9H4A4 650 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 MLXIPQ9HAP2 919 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 GTF3C3Q9Y5Q9 886 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 BRWD1Q9NSI6 2320 aa10.87□□□□□ -0.67
SDC2-207ENST00000522911 IFIT3O14879 490 aaKnown RBP10.86□□□□□ -0.67
SDC2-207ENST00000522911 RPLP2P05387 115 aaKnown RBP10.86□□□□□ -0.67
SDC2-207ENST00000522911 SMIM10L2AP0DMW4 78 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 SMIM10L2BP0DMW5 78 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 CHMLP26374 656 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 CHMP4BP1P59074 171 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 SEMA3FQ13275 785 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 PUS10Q3MIT2 529 aaKnown RBP10.86□□□□□ -0.67
SDC2-207ENST00000522911 LEXMQ3ZCV2 418 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 GIMAP8Q8ND71 665 aaPredicted RBP10.86□□□□□ -0.67
SDC2-207ENST00000522911 NCOA7Q8NI08 942 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 IGDCC4Q8TDY8 1250 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 GDPD5Q8WTR4 605 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 SEPT8Q92599 483 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 MAP4K1Q92918 833 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 ATP6V0A1Q93050 837 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 MRPL38Q96DV4 380 aaKnown RBP10.86□□□□□ -0.67
SDC2-207ENST00000522911 NECAB3Q96P71 396 aaPredicted RBP10.86□□□□□ -0.67
SDC2-207ENST00000522911 GPR20Q99678 358 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 UBE2ZQ9H832 354 aaPredicted RBP10.86□□□□□ -0.67
SDC2-207ENST00000522911 ZNF215Q9UL58 517 aaPredicted RBP10.86□□□□□ -0.67
SDC2-207ENST00000522911 SIP14410 1827 aa10.86□□□□□ -0.67
SDC2-207ENST00000522911 NRCAMQ92823 1304 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 E7EWF7 191 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 C5orf67F2Z3F1 127 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 PI4K2BG5E9Z4 385 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 H3BNC9 293 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
SDC2-207ENST00000522911 MAFGO15525 162 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 SGSM2O43147 1006 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 TREHO43280 583 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 DDAH1O94760 285 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 KIF5BP33176 963 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 THPOP40225 353 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 WTAPQ15007 396 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.85□□□□□ -0.673e-6■■□□□ 13
SDC2-207ENST00000522911 TMCO2Q7Z6W1 182 aaPredicted RBP10.85□□□□□ -0.67
SDC2-207ENST00000522911 CATIPQ7Z7H3 387 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 RALYLQ86SE5 291 aaKnown RBP10.85□□□□□ -0.67
SDC2-207ENST00000522911 HOMER1Q86YM7 354 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 MB21D2Q8IYB1 491 aaPredicted RBP10.85□□□□□ -0.67
SDC2-207ENST00000522911 TMTC2Q8N394 836 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 EXOC6Q8TAG9 804 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 NEK9Q8TD19 979 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 GPKOWQ92917 476 aaPredicted RBP eCLIP10.85□□□□□ -0.675e-11■■■■■ 63.1
SDC2-207ENST00000522911 CDHR1Q96JP9 859 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 MICAL3Q7RTP6 2002 aa10.85□□□□□ -0.67
SDC2-207ENST00000522911 MYH7BA7E2Y1 1941 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.84□□□□□ -0.67
SDC2-207ENST00000522911 MEIS2O14770 477 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 NCK2O43639 380 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 RB1P06400 928 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 PDE4AP27815 886 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 GNAQP50148 359 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 ANTXR2P58335 489 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 PTH1RQ03431 593 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 PTPROQ16827 1216 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 EPC2Q52LR7 807 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 TIGD5Q53EQ6 642 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 TAF2Q6P1X5 1199 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 CYFIP1Q7L576 1253 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 FCHSD1Q86WN1 690 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 FAM178BQ8IXR5 827 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 GPRASP2Q96D09 838 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 LRFN3Q9BTN0 628 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 EHMT1Q9H9B1 1298 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 RC3H2Q9HBD1 1191 aaKnown RBP10.84□□□□□ -0.67
SDC2-207ENST00000522911 SQORQ9Y6N5 450 aa10.84□□□□□ -0.67
SDC2-207ENST00000522911 TCF20Q9UGU0 1960 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms