RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	RAD51AP2	Q09MP3	1159 aa		11.22	□□□□□ -0.61
TCF7-223	ENST00000522653	TAF11	Q15544	211 aa		11.22	□□□□□ -0.61
TCF7-223	ENST00000522653	C4orf50	Q6ZRC1	276 aa		11.22	□□□□□ -0.61
TCF7-223	ENST00000522653	MYOCD	Q8IZQ8	938 aa		11.22	□□□□□ -0.61
TCF7-223	ENST00000522653	PI4K2B	Q8TCG2	481 aa		11.22	□□□□□ -0.61
TCF7-223	ENST00000522653	RUNDC3B	Q96NL0	473 aa		11.22	□□□□□ -0.61
TCF7-223	ENST00000522653	BCAP29	Q9UHQ4	241 aa		11.22	□□□□□ -0.61
TCF7-223	ENST00000522653	FLT1	P17948	1338 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	CDHR2	Q9BYE9	1310 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	RRN3P2	A6NIE6	340 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	KIF1C	O43896	1103 aa	Known RBP	11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	HUS1	O60921	280 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	ARL4A	P40617	200 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	FBXO38	Q6PIJ6	1188 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	IGSF22	Q8N9C0	903 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	SRPK1	Q96SB4	655 aa	Known RBP	11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	CAPS2	Q9BXY5	557 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	PDE11A	Q9HCR9	933 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	IGSF1	Q8N6C5	1336 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	IKBKB	O14920	756 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	PRR29	P0C7W0	189 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	STAT3	P40763	770 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	SNRNP48	Q6IEG0	339 aa	Known RBP	11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	PHACTR3	Q96KR7	559 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	MFSD1	Q9H3U5	465 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	ELP3	Q9H9T3	547 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	CTTNBP2NL	Q9P2B4	639 aa		11.21	□□□□□ -0.61
TCF7-223	ENST00000522653	KIF1B	O60333	1816 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	SPATA31A1	Q5TZJ5	1347 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	CLCN6	P51797	869 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	C8orf74	Q6P047	294 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	IFT20	Q8IY31	132 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	CACNA2D3	Q8IZS8	1091 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	XPO4	Q9C0E2	1151 aa	Known RBP	11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	SRP68	Q9UHB9	627 aa	Known RBP	11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	MAGEB2	O15479	319 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	HPD	P32754	393 aa	Predicted RBP	11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	SH3BGR	P55822	239 aa	Predicted RBP	11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	CTDSPL2	Q05D32	466 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	SEPT6	Q14141	434 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	SNCB	Q16143	134 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	TMTC1	Q8IUR5	882 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	BBOF1	Q8ND07	529 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	ZC3H15	Q8WU90	426 aa	Known RBP	11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	NT5C1B	Q96P26	610 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	ATP6V0A4	Q9HBG4	840 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	COPRS	Q9NQ92	184 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	ANKFY1	Q9P2R3	1169 aa		11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.21	□□□□□ -0.62
TCF7-223	ENST00000522653	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	CCDC160	A6NGH7	325 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	IPO5	O00410	1097 aa	Known RBP	11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	AP3M2	P53677	418 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	FAM47A	Q5JRC9	791 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	CSGALNACT2	Q8N6G5	542 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	GAS2L1	Q99501	681 aa	Predicted RBP	11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	SLC38A10	Q9HBR0	1119 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	BAIAP2L1	Q9UHR4	511 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	ANGPTL3	Q9Y5C1	460 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	SNX14	Q9Y5W7	946 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	MET	P08581	1390 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	PNMA6A	P0CW24	399 aa	Predicted RBP	11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	IFNA8	P32881	189 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	PAK1	Q13153	545 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	TTBK2	Q6IQ55	1244 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	MLKL	Q8NB16	471 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	STKLD1	Q8NE28	680 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	CHST13	Q8NET6	341 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	RSAD2	Q8WXG1	361 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	TSSK1B	Q9BXA7	367 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	RABEP2	Q9H5N1	569 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	SLC38A7	Q9NVC3	462 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	TTLL3	Q9Y4R7	772 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653		H7C4K7	107 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	GDF11	O95390	407 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	PSMD2	Q13200	908 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	COG2	Q14746	738 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	UBN1	Q9NPG3	1134 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	ATXN3	P54252	364 aa	Predicted RBP	11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	MIGA2	Q7L4E1	593 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	SKA2	Q8WVK7	121 aa	Predicted RBP	11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	SEPT8	Q92599	483 aa		11.2	□□□□□ -0.62
TCF7-223	ENST00000522653	PNMA6F	A0A0J9YX94	578 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	LMNB2	Q03252	620 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	PLD1	Q13393	1074 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	E2F4	Q16254	413 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	LONRF2	Q1L5Z9	754 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	SRRM1	Q8IYB3	904 aa	Known RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	TSEN34	Q9BSV6	310 aa	Known RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	LRRC2	Q9BYS8	371 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	GREM2	Q9H772	168 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	RNF146	Q9NTX7	359 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	LUC7L3	O95232	432 aa	Known RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	PHB	P35232	272 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	ORC2	Q13416	577 aa	Predicted RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms