RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 A0A1W2PQC6 194 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 DLATP10515 647 aaKnown RBP15.05■□□□□ -0
SYNPO-205ENST00000522122 SEMA3FQ13275 785 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 GNPTABQ3T906 1256 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 FAM186BQ8IYM0 893 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 DYNLL2Q96FJ2 89 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 ADD3Q9UEY8 706 aaKnown RBP15.05■□□□□ -0
SYNPO-205ENST00000522122 GAP43P17677 238 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 KIF11P52732 1056 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 CACNB1Q02641 598 aaPredicted RBP15.04■□□□□ -0
SYNPO-205ENST00000522122 MESDQ14696 234 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 PFKFB3Q16875 520 aaPredicted RBP15.04■□□□□ -0
SYNPO-205ENST00000522122 LRCH2Q5VUJ6 765 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 CCDC13Q8IYE1 715 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 EMILIN3Q9NT22 766 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 STK38LQ9Y2H1 464 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.04■□□□□ -0
SYNPO-205ENST00000522122 SUSD4Q5VX71 490 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 PALM2Q8IXS6 379 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 RSAD2Q8WXG1 361 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 JCADQ9P266 1359 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 H0YCG3 227 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 FTCDO95954 541 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 MECOMQ03112 1051 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 LRRC63Q05C16 580 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 SEPT2Q15019 361 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 MUM1L1Q5H9M0 696 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 ENAHQ8N8S7 591 aaPredicted RBP15.04■□□□□ -0
SYNPO-205ENST00000522122 FAM133AQ8N9E0 248 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 RUBCNQ92622 972 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 VIPAS39Q9H9C1 493 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 STK32BQ9NY57 414 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 CSF1RP07333 972 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 MAP2K2P36507 400 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 PRCPP42785 496 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 MYL7Q01449 175 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 CASC4Q6P4E1 433 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 SMC1BQ8NDV3 1235 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 HNRNPLLQ8WVV9 542 aaKnown RBP15.04■□□□□ -0
SYNPO-205ENST00000522122 USP21Q9UK80 565 aa15.04■□□□□ -0
SYNPO-205ENST00000522122 EMBQ6PCB8 327 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 MCF2L2Q86YR7 1114 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 PHF20Q9BVI0 1012 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 TRPC6Q9Y210 931 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 CLEC11AQ9Y240 323 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.03■□□□□ -0
SYNPO-205ENST00000522122 MYO1FO00160 1098 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 PRPF6O94906 941 aaKnown RBP15.03■□□□□ -0
SYNPO-205ENST00000522122 VSNL1P62760 191 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 CCDC38Q502W7 563 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 ARHGEF16Q5VV41 709 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 RAD9BQ6WBX8 426 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 KCTD1Q719H9 257 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 BBOF1Q8ND07 529 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.03■□□□□ -0
SYNPO-205ENST00000522122 INTS9Q9NV88 658 aaKnown RBP15.03■□□□□ -0
SYNPO-205ENST00000522122 USP17L3A6NCW0 530 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 USP17L4A6NCW7 530 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 SERPING1P05155 500 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 ATF7P17544 494 aaPredicted RBP15.03■□□□□ -0
SYNPO-205ENST00000522122 SLC16A2P36021 539 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 USP17L1Q7RTZ2 530 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 XRN1Q8IZH2 1706 aaKnown RBP15.03■□□□□ -0
SYNPO-205ENST00000522122 SPATA31A3Q5VYP0 1347 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 ATF2P15336 505 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 PHBP35232 272 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 NSFP46459 744 aaKnown RBP15.03■□□□□ -0
SYNPO-205ENST00000522122 RNF10Q8N5U6 811 aaKnown RBP15.03■□□□□ -0
SYNPO-205ENST00000522122 GLG1Q92896 1179 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 KANSL2Q9H9L4 492 aa15.03■□□□□ -0
SYNPO-205ENST00000522122 TRIM49BA6NDI0 452 aa15.02■□□□□ -0
SYNPO-205ENST00000522122 DIXDC1Q155Q3 683 aa15.02■□□□□ -0
SYNPO-205ENST00000522122 HADHQ16836 314 aaKnown RBP15.02■□□□□ -0
SYNPO-205ENST00000522122 RNF34Q969K3 372 aa15.02■□□□□ -0
SYNPO-205ENST00000522122 PTK2Q05397 1052 aa15.02■□□□□ -0
SYNPO-205ENST00000522122 IFT88Q13099 833 aa15.02■□□□□ -0
SYNPO-205ENST00000522122 PBKQ96KB5 322 aa15.02■□□□□ -0
SYNPO-205ENST00000522122 TRIM6Q9C030 488 aaPredicted RBP15.02■□□□□ -0
SYNPO-205ENST00000522122 ZNF148Q9UQR1 794 aa15.02■□□□□ -0
SYNPO-205ENST00000522122 DMP1Q13316 513 aaPredicted RBP15.02□□□□□ -0.01
SYNPO-205ENST00000522122 CCDC93Q567U6 631 aa15.02□□□□□ -0.01
SYNPO-205ENST00000522122 NIM1KQ8IY84 436 aa15.02□□□□□ -0.01
SYNPO-205ENST00000522122 NT5C1BQ96P26 610 aa15.02□□□□□ -0.01
SYNPO-205ENST00000522122 BSDC1Q9NW68 430 aaPredicted RBP15.02□□□□□ -0.01
SYNPO-205ENST00000522122 SNAP23O00161 211 aa15.02□□□□□ -0.01
SYNPO-205ENST00000522122 SRGAP2O75044 1071 aa15.02□□□□□ -0.01
SYNPO-205ENST00000522122 HIP1RO75146 1068 aa15.02□□□□□ -0.01
SYNPO-205ENST00000522122 GGCXP38435 758 aa15.02□□□□□ -0.01
SYNPO-205ENST00000522122 BPIFB4P59827 614 aa15.02□□□□□ -0.01
SYNPO-205ENST00000522122 GLE1Q53GS7 698 aaKnown RBP15.02□□□□□ -0.01
SYNPO-205ENST00000522122 C10orf76Q5T2E6 689 aa15.02□□□□□ -0.01
SYNPO-205ENST00000522122 IRX2Q9BZI1 471 aaPredicted RBP15.02□□□□□ -0.01
SYNPO-205ENST00000522122 KDM6AO15550 1401 aaPredicted RBP15.02□□□□□ -0.01
SYNPO-205ENST00000522122 C1orf167Q5SNV9 1468 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 CLIC2O15247 247 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 P4HA1P13674 534 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 MFAP3P55082 362 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 POMGNT1Q8WZA1 660 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 ATP2A3Q93084 1043 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms