RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SLC24A3Q9HC58 644 aa10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 ATP8A2Q9NTI2 1148 aa10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 ZBED9Q6R2W3 1325 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 C5orf67F2Z3F1 127 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 KPNA6O60684 536 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 KDM4AO75164 1064 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 SURF6O75683 361 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 MBD4O95243 580 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 PARNO95453 639 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 ALAS1P13196 640 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 ICAM3P32942 547 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 CHMP4BP1P59074 171 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 ZNF200P98182 395 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 CCDC155Q8N6L0 562 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 RIPOR3Q96MK2 946 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 TMUB1Q9BVT8 246 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 CTDP1Q9Y5B0 961 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 NLRC5Q86WI3 1866 aa10.61□□□□□ -0.71
TRAPPC9-212ENST00000521944 TMEM232C9JQI7 657 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 E9PSI1 815 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 GLP2RO95838 553 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 CD46P15529 392 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 GCGRP47871 477 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 ALDH5A1P51649 535 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 COASYQ13057 564 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 BAATQ14032 418 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 TKFCQ3LXA3 575 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 DGLUCYQ7Z3D6 616 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 RPAP2Q8IXW5 612 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 LRRC47Q8N1G4 583 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 GMCL1P1Q8NEA9 526 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 INCENPQ9NQS7 918 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 FAM217BQ9NTX9 383 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 HDAC6Q9UBN7 1215 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 GTF2IRD1Q9UHL9 959 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 USP15Q9Y4E8 981 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 ZFYVE26Q68DK2 2539 aa10.6□□□□□ -0.71
TRAPPC9-212ENST00000521944 NR1I2O75469 434 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 UPP2O95045 317 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 AMHP03971 560 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 BMP3P12645 472 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 DNAJB1P25685 340 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 BMPR1AP36894 532 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 ATP8B2P98198 1209 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 OS9Q13438 667 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 PTPN21Q16825 1174 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 PLEKHG4Q58EX7 1191 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 NSMFQ6X4W1 530 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 ADGRD2Q7Z7M1 963 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 TRMT2AQ8IZ69 625 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 STK11IPQ8N1F8 1099 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 AFG1LQ8WV93 481 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 CHMP4CQ96CF2 233 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 CEP95Q96GE4 821 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 RPGRIP1Q96KN7 1286 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 YME1L1Q96TA2 773 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 PHF7Q9BWX1 381 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 MTMR4Q9NYA4 1195 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 FAM208BQ5VWN6 2430 aa10.59□□□□□ -0.71
TRAPPC9-212ENST00000521944 MYH4Q9Y623 1939 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 NFIBO00712 420 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 NKRFO15226 690 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 CSPG5O95196 566 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 MMP3P08254 477 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 FDX1P10109 184 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 EDNRBP24530 442 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 RBM10P98175 930 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 PTK7Q13308 1070 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 SLFN13Q68D06 897 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 CCDC62Q6P9F0 684 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 RASGRP2Q7LDG7 609 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 STAG1Q8WVM7 1258 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 SUSD6Q92537 303 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 ARHGAP45Q92619 1136 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 LMAN2LQ9H0V9 348 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 RC3H2Q9HBD1 1191 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 PCDHGC5Q9Y5F6 944 aa10.58□□□□□ -0.72
TRAPPC9-212ENST00000521944 GOLIM4O00461 696 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 RB1P06400 928 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 TXNP10599 105 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 CTNNB1P35222 781 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 ADD2P35612 726 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 NDUFV1P49821 464 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 STAT2P52630 851 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 COPS2P61201 443 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 USP46P62068 366 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 PPP2R5BQ15173 497 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 TTF1Q15361 905 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 BRDTQ58F21 947 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 EFHBQ8N7U6 833 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 CLP1Q92989 425 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 SMOC2Q9H3U7 446 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 RALYQ9UKM9 306 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 BARX2Q9UMQ3 279 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 RALGAPA2Q2PPJ7 1873 aa10.57□□□□□ -0.72
TRAPPC9-212ENST00000521944 HAS3O00219 553 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 PLA2G6O60733 806 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 MMP1P03956 469 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms