RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TELO2Q9Y4R8 837 aa23.58■■□□□ 1.37
TRIM35-203ENST00000521253 LAMA2P24043 3122 aaKnown RBP23.58■■□□□ 1.37
TRIM35-203ENST00000521253 MAFGO15525 162 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 DTNBO60941 627 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 CTDNEP1O95476 244 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 FXR1P51114 621 aaKnown RBP eCLIP23.57■■□□□ 1.36
TRIM35-203ENST00000521253 NLRP5P59047 1200 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 MFSD10Q14728 455 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 MCTP2Q6DN12 878 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 GIMAP8Q8ND71 665 aaPredicted RBP23.57■■□□□ 1.36
TRIM35-203ENST00000521253 CRYGNQ8WXF5 182 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 KIF2CQ99661 725 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 GPR20Q99678 358 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 KATNAL1Q9BW62 490 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 KCNH7Q9NS40 1196 aa23.57■■□□□ 1.36
TRIM35-203ENST00000521253 HAS3O00219 553 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 SLC34A2O95436 690 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 SUPT20HL2P0C7V6 817 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 CYP2C9P11712 490 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 SP4Q02446 784 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 KIAA0753Q2KHM9 967 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 MFSD5Q6N075 450 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 SESTD1Q86VW0 696 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 GTF3C6Q969F1 213 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 C16orf70Q9BSU1 422 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 ALG1Q9BT22 464 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 NOC4LQ9BVI4 516 aaKnown RBP23.56■■□□□ 1.36
TRIM35-203ENST00000521253 HIPK3Q9H422 1215 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 UMODL1Q5DID0 1318 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 STK36Q9NRP7 1315 aa23.56■■□□□ 1.36
TRIM35-203ENST00000521253 LGALS2P05162 132 aa23.55■■□□□ 1.36
TRIM35-203ENST00000521253 CYP2C18P33260 490 aa23.55■■□□□ 1.36
TRIM35-203ENST00000521253 EPHB4P54760 987 aa23.55■■□□□ 1.36
TRIM35-203ENST00000521253 FPGSQ05932 587 aa23.55■■□□□ 1.36
TRIM35-203ENST00000521253 MYH7BA7E2Y1 1941 aa23.55■■□□□ 1.36
TRIM35-203ENST00000521253 FAM86B1E9PN63 330 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 MEIS1O00470 390 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 CYP3A4P08684 503 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 FAM86B2P0C5J1 330 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 ARP10275 920 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 ZNF76P36508 570 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 RBM25P49756 843 aaKnown RBP23.54■■□□□ 1.36
TRIM35-203ENST00000521253 GDF6Q6KF10 455 aaPredicted RBP23.54■■□□□ 1.36
TRIM35-203ENST00000521253 C7orf31Q8N865 590 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 HDAC6Q9UBN7 1215 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 GTF2IRD1Q9UHL9 959 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 PCDHA4Q9UN74 947 aa23.54■■□□□ 1.36
TRIM35-203ENST00000521253 SZT2Q5T011 3432 aa23.53■■□□□ 1.36
TRIM35-203ENST00000521253 H3BRB1 525 aa23.53■■□□□ 1.36
TRIM35-203ENST00000521253 SHHQ15465 462 aa23.53■■□□□ 1.36
TRIM35-203ENST00000521253 NPY5RQ15761 445 aa23.53■■□□□ 1.36
TRIM35-203ENST00000521253 C9orf50Q5SZB4 431 aa23.53■■□□□ 1.36
TRIM35-203ENST00000521253 NIPA1Q7RTP0 329 aa23.53■■□□□ 1.36
TRIM35-203ENST00000521253 FAM177A1Q8N128 213 aaPredicted RBP23.53■■□□□ 1.36
TRIM35-203ENST00000521253 TUT1Q9H6E5 874 aaKnown RBP23.53■■□□□ 1.36
TRIM35-203ENST00000521253 AGO4Q9HCK5 861 aaKnown RBP23.53■■□□□ 1.36
TRIM35-203ENST00000521253 CSF2RAP15509 400 aa23.52■■□□□ 1.36
TRIM35-203ENST00000521253 PTGISQ16647 500 aa23.52■■□□□ 1.36
TRIM35-203ENST00000521253 TRIM50Q86XT4 487 aa23.52■■□□□ 1.36
TRIM35-203ENST00000521253 TMEM199Q8N511 208 aa23.52■■□□□ 1.36
TRIM35-203ENST00000521253 CTAGE1Q96RT6 745 aa23.52■■□□□ 1.36
TRIM35-203ENST00000521253 WNT8AQ9H1J5 351 aa23.52■■□□□ 1.36
TRIM35-203ENST00000521253 ORC3Q9UBD5 711 aaPredicted RBP23.52■■□□□ 1.36
TRIM35-203ENST00000521253 KCNJ14Q9UNX9 436 aa23.52■■□□□ 1.36
TRIM35-203ENST00000521253 NOD1Q9Y239 953 aa23.52■■□□□ 1.36
TRIM35-203ENST00000521253 IGLV3-22A0A075B6J6 115 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 GSTTP1A0A1W2PQM5 241 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 SOX1O00570 391 aaPredicted RBP23.51■■□□□ 1.35
TRIM35-203ENST00000521253 FDPSP14324 419 aaKnown RBP23.51■■□□□ 1.35
TRIM35-203ENST00000521253 TCF7P36402 384 aaPredicted RBP23.51■■□□□ 1.35
TRIM35-203ENST00000521253 CCL23P55773 120 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 ITGB3BPQ13352 177 aaPredicted RBP23.51■■□□□ 1.35
TRIM35-203ENST00000521253 LRIT3Q3SXY7 679 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 UTP14CQ5TAP6 766 aaKnown RBP23.51■■□□□ 1.35
TRIM35-203ENST00000521253 GALNT17Q6IS24 598 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 PLA2G4DQ86XP0 818 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 BLIDQ8IZY5 108 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 DAGLBQ8NCG7 672 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 NSUN7Q8NE18 718 aaKnown RBP23.51■■□□□ 1.35
TRIM35-203ENST00000521253 SEPT1Q8WYJ6 367 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 JPH1Q9HDC5 661 aaPredicted RBP23.51■■□□□ 1.35
TRIM35-203ENST00000521253 LIMCH1Q9UPQ0 1083 aa23.51■■□□□ 1.35
TRIM35-203ENST00000521253 M0R2N6 131 aa23.5■■□□□ 1.35
TRIM35-203ENST00000521253 ST3GAL1Q11201 340 aa23.5■■□□□ 1.35
TRIM35-203ENST00000521253 PPIGQ13427 754 aaKnown RBP eCLIP23.5■■□□□ 1.352e-11■■■■□ 24.1
TRIM35-203ENST00000521253 SDF4Q9BRK5 362 aa23.5■■□□□ 1.35
TRIM35-203ENST00000521253 PHF20Q9BVI0 1012 aa23.5■■□□□ 1.35
TRIM35-203ENST00000521253 GJB4Q9NTQ9 266 aa23.5■■□□□ 1.35
TRIM35-203ENST00000521253 SLC9A2Q9UBY0 812 aa23.5■■□□□ 1.35
TRIM35-203ENST00000521253 NFASCO94856 1347 aa23.5■■□□□ 1.35
TRIM35-203ENST00000521253 DOCK5Q9H7D0 1870 aa23.49■■□□□ 1.35
TRIM35-203ENST00000521253 EDIL3O43854 480 aa23.49■■□□□ 1.35
TRIM35-203ENST00000521253 JAK2O60674 1132 aa23.49■■□□□ 1.35
TRIM35-203ENST00000521253 CIITAP33076 1130 aa23.49■■□□□ 1.35
TRIM35-203ENST00000521253 HIC1Q14526 733 aa23.49■■□□□ 1.35
TRIM35-203ENST00000521253 C16orf59Q7L2K0 433 aa23.49■■□□□ 1.35
TRIM35-203ENST00000521253 WASF1Q92558 559 aa23.49■■□□□ 1.35
TRIM35-203ENST00000521253 ZNF215Q9UL58 517 aaPredicted RBP23.49■■□□□ 1.35
TRIM35-203ENST00000521253 SMIM10L2AP0DMW4 78 aa23.48■■□□□ 1.35
TRIM35-203ENST00000521253 SMIM10L2BP0DMW5 78 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms