RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 NID2Q14112 1375 aa19.56■□□□□ 0.72
SQLE-205ENST00000521232 CHD9Q3L8U1 2897 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 GRXCR1A8MXD5 290 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 H3BRB1 525 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 NOP56O00567 594 aaKnown RBP19.55■□□□□ 0.72
SQLE-205ENST00000521232 MAFGO15525 162 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 ITGB5P18084 799 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 DNAJB2P25686 324 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 EVCP57679 992 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 RBL2Q08999 1139 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 CCDC155Q8N6L0 562 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 AFAP1L1Q8TED9 768 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 DHX38Q92620 1227 aaKnown RBP19.55■□□□□ 0.72
SQLE-205ENST00000521232 GLT8D2Q9H1C3 349 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 TUT1Q9H6E5 874 aaKnown RBP19.55■□□□□ 0.72
SQLE-205ENST00000521232 ZSWIM6Q9HCJ5 1215 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 TET1Q8NFU7 2136 aa19.55■□□□□ 0.72
SQLE-205ENST00000521232 SMCO2A6NFE2 343 aa19.54■□□□□ 0.72
SQLE-205ENST00000521232 ATP9AO75110 1047 aa19.54■□□□□ 0.72
SQLE-205ENST00000521232 FOSP01100 380 aaPredicted RBP19.54■□□□□ 0.72
SQLE-205ENST00000521232 LGALS2P05162 132 aa19.54■□□□□ 0.72
SQLE-205ENST00000521232 PTK7Q13308 1070 aa19.54■□□□□ 0.72
SQLE-205ENST00000521232 PFKFB3Q16875 520 aaPredicted RBP19.54■□□□□ 0.72
SQLE-205ENST00000521232 RUFY3Q7L099 469 aa19.54■□□□□ 0.72
SQLE-205ENST00000521232 DEFB128Q7Z7B8 93 aa19.54■□□□□ 0.72
SQLE-205ENST00000521232 CDX2Q99626 313 aaPredicted RBP19.54■□□□□ 0.72
SQLE-205ENST00000521232 PBX4Q9BYU1 374 aa19.54■□□□□ 0.72
SQLE-205ENST00000521232 EHMT1Q9H9B1 1298 aa19.54■□□□□ 0.72
SQLE-205ENST00000521232 JADE2Q9NQC1 790 aa19.54■□□□□ 0.72
SQLE-205ENST00000521232 EYSQ5T1H1 3165 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 MYO9BQ13459 2157 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 KCNA2P16389 499 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 HOXC8P31273 242 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 CLK2P49760 499 aaKnown RBP19.53■□□□□ 0.72
SQLE-205ENST00000521232 ADCY7P51828 1080 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 HIC1Q14526 733 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 TIFAQ96CG3 184 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 TELO2Q9Y4R8 837 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 TANC1Q9C0D5 1861 aa19.53■□□□□ 0.72
SQLE-205ENST00000521232 PRPF3O43395 683 aaKnown RBP19.52■□□□□ 0.72
SQLE-205ENST00000521232 PARNO95453 639 aaKnown RBP19.52■□□□□ 0.72
SQLE-205ENST00000521232 CKBP12277 381 aa19.52■□□□□ 0.72
SQLE-205ENST00000521232 SCG2P13521 617 aa19.52■□□□□ 0.72
SQLE-205ENST00000521232 SELPP16109 830 aa19.52■□□□□ 0.72
SQLE-205ENST00000521232 PDIA3P30101 505 aaKnown RBP19.52■□□□□ 0.72
SQLE-205ENST00000521232 PBX2P40425 430 aa19.52■□□□□ 0.72
SQLE-205ENST00000521232 ZNF200P98182 395 aaPredicted RBP19.52■□□□□ 0.72
SQLE-205ENST00000521232 MTMR1Q13613 665 aa19.52■□□□□ 0.72
SQLE-205ENST00000521232 GPNMBQ14956 572 aa19.52■□□□□ 0.72
SQLE-205ENST00000521232 NTRK3Q16288 839 aa19.52■□□□□ 0.72
SQLE-205ENST00000521232 TRIM71Q2Q1W2 868 aaKnown RBP19.52■□□□□ 0.72
SQLE-205ENST00000521232 SLC4A7Q9Y6M7 1214 aa19.52■□□□□ 0.72
SQLE-205ENST00000521232 ACTN1P12814 892 aa19.51■□□□□ 0.71
SQLE-205ENST00000521232 AP3B2Q13367 1082 aa19.51■□□□□ 0.71
SQLE-205ENST00000521232 RAB30Q15771 203 aa19.51■□□□□ 0.71
SQLE-205ENST00000521232 PKN1Q16512 942 aa19.51■□□□□ 0.71
SQLE-205ENST00000521232 LRRC8DQ7L1W4 858 aa19.51■□□□□ 0.71
SQLE-205ENST00000521232 MXRA8Q9BRK3 442 aa19.51■□□□□ 0.71
SQLE-205ENST00000521232 RNPEPQ9H4A4 650 aa19.51■□□□□ 0.71
SQLE-205ENST00000521232 ZNF576Q9H609 170 aa19.51■□□□□ 0.71
SQLE-205ENST00000521232 CYP46A1Q9Y6A2 500 aa19.51■□□□□ 0.71
SQLE-205ENST00000521232 ESYT2A0FGR8 921 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 C17orf102A2RUQ5 167 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 SMIM10L2AP0DMW4 78 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 SMIM10L2BP0DMW5 78 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 TOB2Q14106 344 aaPredicted RBP19.5■□□□□ 0.71
SQLE-205ENST00000521232 SERINC5Q86VE9 423 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 SEPT1Q8WYJ6 367 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 WNT8BQ93098 351 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 PGBD1Q96JS3 809 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 ANO3Q9BYT9 981 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 FTOQ9C0B1 505 aaKnown RBP eCLIP19.5■□□□□ 0.713e-8■■■■□ 21
SQLE-205ENST00000521232 ZMYND12Q9H0C1 365 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 MSRAQ9UJ68 235 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 ZNF215Q9UL58 517 aaPredicted RBP19.5■□□□□ 0.71
SQLE-205ENST00000521232 KAT6AQ92794 2004 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 UNC80Q8N2C7 3258 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 PRUNE2Q8WUY3 3088 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 CHD7Q9P2D1 2997 aa19.5■□□□□ 0.71
SQLE-205ENST00000521232 GSTTP1A0A1W2PQM5 241 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 ZBBXA8MT70 800 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 CXCL10P02778 98 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 CENPBP07199 599 aaPredicted RBP19.49■□□□□ 0.71
SQLE-205ENST00000521232 IFNAR1P17181 557 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 SREBF1P36956 1147 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 SP4Q02446 784 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 GRIN2CQ14957 1233 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 UTP14CQ5TAP6 766 aaKnown RBP19.49■□□□□ 0.71
SQLE-205ENST00000521232 TRAF7Q6Q0C0 670 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 CYP2W1Q8TAV3 490 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 ATP6V0A1Q93050 837 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 PHKBQ93100 1093 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 RNF26Q9BY78 433 aaPredicted RBP19.49■□□□□ 0.71
SQLE-205ENST00000521232 KCNH7Q9NS40 1196 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 TMEM260Q9NX78 707 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 GBF1Q92538 1859 aa19.49■□□□□ 0.71
SQLE-205ENST00000521232 MEIS1O00470 390 aa19.48■□□□□ 0.71
SQLE-205ENST00000521232 ATP2A2P16615 1042 aaKnown RBP19.48■□□□□ 0.71
SQLE-205ENST00000521232 TCF7P36402 384 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms